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SCNpilot_cont_300_bf_scaffold_966_25

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 21169..23322

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide synthesis/transport transmembrane protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JD09_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 713.0
  • Bit_score: 790
  • Evalue 1.40e-225
Succinoglycan biosynthesis transport protein ExoP {ECO:0000313|EMBL:EYR81347.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Sh similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 759.0
  • Bit_score: 795
  • Evalue 5.90e-227
polysaccharide synthesis/transport transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 58.6
  • Coverage: 713.0
  • Bit_score: 790
  • Evalue 3.80e-226

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2154
ATGTCGGGCGCAAATCATCAGCAGGATGTCGATATCGATCTCGGCCAGCTTTTCCGGGCGATCTGGAAAAGGAAGGGCAGGGTTCTCGCCATCACCGTCGCCGCCGCAATCCTGGCCTATGGCGGCGCGCGGCTGATTTCGCCGACCTATCGCAGCGAAAGCCGCATCCTCATCGAACAGCGCACGCCGACCTATAACAGCGGCAAGGGCGACCAGGGCGCGCCCGGCGAAAGCCAGCCGCTGCTCGACGACCTCAACATCGCCAGCCAGGTGCAGGTGCTGCAATCCGTCGACCTGATCAAGCAGGTGGCCCGCGACCTGAAGCTCTACGAGCGCGAGGAATTCGACCCGACCGTCAAGCCGTCGGCCATCTCCGACGTCATGGTGCTGCTCGGCCTCAAGAGCAATCCGCTGGATCTCGCTCCCGAGGAGCGGGTCATCAAGGAATTCACCGACCGGCTGACCGTCTACCAGGCGGAGAAGTCGCGCGTCATCGGCATACAGTTCTCGTCGAAGGATCCGAAGCTCGCCGCCGCCGTGCCGAACGAGATGGTGCGCGTTTATCTATCGTTGCAAAGCGGCGCCAAGCTCGACACCAATTCCGAGGCCGCCCGCTGGCTGGAGCCGGAAATCGCCAACCTGCGCGAAAAGGTGCGCGAGGCGGAAAAGAAGGTTGCCGATTACCGCGCCTCGGCCGATCTGCTTCAGACCGGCGATGCGACCACCGGCGGCACCTTCGTCAGCCGCCAGCTCGCCGATATCTCCACCGAGCTGACCCGCGTACGCGGCGAGAAGGCGACGGCGGAGGCACGCGCTGAAAACGTTCGCGCCGCCTTGCAGGACGGCCGTTCGCTCGACACGCTGACCGATGTCGCCGGCGCGCAAATCATCCAGCGCCTCAAGGAAACGCAGTCGCAGCTTCAGGCGCAGATTTCCGATCTCTCGACTTCGCTGCTCGACGGCCATCCGCGCATCAAGGGCCTGCGCGCACAGCTGGCGGATGTGCGCGCCCAGATCGAGCGCGAGGGCCAGAAGGTCATTTCCGGCTTCACCAACGATGCCAAGGTCGCGCAGATGCGTGAGCGCCAGCTTCTCGGCCAGCTCAATGCCCTGAAGGCCGATTCGGCCCGTGCCGGCAACGATACGGTGGAGCTGAATGCCTTGGAGCGCGAAGCGGCCGCCCAGCGGCAATTGCTCGAAACCTATCTCGCCCGCTACCGCGAGGCCTCCTCGCGCATCGACAAGAATGCGACGCCGGCCGATGCCCGCATCATCTCTCGCGCCGTCGATCCGCAGGAGCCCTATTTCCCGAAGGTGCTGCCGATCGTCATCGTCGCAGCGCTCGCTGGTTTCGTGCTCTCCTCCGTTGTCATCATGCTGATGGAACTGTTCAGCGGTCGCGCCCTGAAGCCGGTCGGCCCGGCTGTGCCGGCGGTTGTCGCAGCACCCATCGTCGCGAAGCGCCCTGACGAGGAGGTGAAGGATGCGCCCGTCAGCCTTCTTGCCGACCAGCCGGAGGAACTCCCGGCGGCTGTCGCCCAACCGGTGGATGCGCAGCCGGAAGAGGACGAGTTTTCCGTCGCCTCGGTCGCCGCCCTCTTGGCGGCGCGCCCAGGCAAGATCGTCATCAGCCTGTCGCCGGATGGCGACGCCGGCTCGGCGATGACGGTGGCGCTCGCCCGGCAGCTCGGTGAAAACGGCCTGCACACCGTGCTGCTCGATCTCACCGGCTCCGGTTGCCCGAGCCGCCTGATGGCATCAGTCCCGAAACTGCCGGGCATCACCGACCTGCTGCAAGGCAAGGCCGCTTTCGCCCAGACCATCCATTCCGACCGGGATTCGACGGCGCATGTCATCCCGCAGGGCAATGCCGATTTCATCGGCGCCATGCGCGCTTCAGAACGCCTTTCGATGATCGTCGATGCCCTGGCCGAGGTTTACGATCGTGTCGTCGTCGAATGCGGACCGGCGCCCGCCCATGCCATCGAGCGGGTATCGCGCAATCGCGAGGCGCATATCGTCCTGTCGATGCCGAAGCCGGAGGAGCGCAAGCTGGCCAAGGCGCTTGGCGAACTCTCCAAGGCCGGTTACGCGAATCCGATCCTGCTCTCGGACCCCGATCATCCTTCGCTCGCGGCGTCGCGCGCCGCCTGA
PROTEIN sequence
Length: 718
MSGANHQQDVDIDLGQLFRAIWKRKGRVLAITVAAAILAYGGARLISPTYRSESRILIEQRTPTYNSGKGDQGAPGESQPLLDDLNIASQVQVLQSVDLIKQVARDLKLYEREEFDPTVKPSAISDVMVLLGLKSNPLDLAPEERVIKEFTDRLTVYQAEKSRVIGIQFSSKDPKLAAAVPNEMVRVYLSLQSGAKLDTNSEAARWLEPEIANLREKVREAEKKVADYRASADLLQTGDATTGGTFVSRQLADISTELTRVRGEKATAEARAENVRAALQDGRSLDTLTDVAGAQIIQRLKETQSQLQAQISDLSTSLLDGHPRIKGLRAQLADVRAQIEREGQKVISGFTNDAKVAQMRERQLLGQLNALKADSARAGNDTVELNALEREAAAQRQLLETYLARYREASSRIDKNATPADARIISRAVDPQEPYFPKVLPIVIVAALAGFVLSSVVIMLMELFSGRALKPVGPAVPAVVAAPIVAKRPDEEVKDAPVSLLADQPEELPAAVAQPVDAQPEEDEFSVASVAALLAARPGKIVISLSPDGDAGSAMTVALARQLGENGLHTVLLDLTGSGCPSRLMASVPKLPGITDLLQGKAAFAQTIHSDRDSTAHVIPQGNADFIGAMRASERLSMIVDALAEVYDRVVVECGPAPAHAIERVSRNREAHIVLSMPKPEERKLAKALGELSKAGYANPILLSDPDHPSLAASRAA*