ggKbase home page

SCNpilot_cont_300_bf_scaffold_979_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(1232..1723)

Top 3 Functional Annotations

Value Algorithm Source
major facilitator transporter n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036EC2D8 similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 155.0
  • Bit_score: 177
  • Evalue 1.20e-41
Multidrug efflux transporter {ECO:0000313|EMBL:EYR79176.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 157.0
  • Bit_score: 184
  • Evalue 1.10e-43
major facilitator superfamily protein similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 155.0
  • Bit_score: 174
  • Evalue 2.30e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
GTGGCGCTCGGCTGGACGGCGGCGGCCTTTCTCAGCAGCAATTTCAAGGGCGAGACGATGCGCCGGTCGATCATCTGGGGTGGCCTGATGGAGGCGGCCTGCATCGGGCTCCTGGCTTTCAGCCTGGCGCGGCCAAATCCCGAGGGTGACCTTATGCTGCTCTCGGCGGCGACTGTGCTGATCTTCGGCATGGGGTTCGGCGTCGGCCTCGGCTGGGCGCATCTGGTTACCCATATCCTGCATCTCGCCGCCGATGACGAGAAGGACAAGGCGTCCGCCGGCATCACCACCATGCAATCGCTCGGCAGCGCCTTTGGCGCGGCTCTGGCTGGCGTGACGGTCAACAGCACCGGCCTGCTGCATCCGGGCGGCCTCGAAGGCAATGCATCGGCTGCCGCCTGGCTCTTCGCGCTCTTTGCCCTGCCGGCGCTGGCGGCGGCGCTTGCCGCGCTGTCGCTGCCGCGTCCGCGCTTCGGGGAGATGACCGCGTGA
PROTEIN sequence
Length: 164
VALGWTAAAFLSSNFKGETMRRSIIWGGLMEAACIGLLAFSLARPNPEGDLMLLSAATVLIFGMGFGVGLGWAHLVTHILHLAADDEKDKASAGITTMQSLGSAFGAALAGVTVNSTGLLHPGGLEGNASAAAWLFALFALPALAAALAALSLPRPRFGEMTA*