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SCNpilot_cont_300_bf_scaffold_1129_30

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 25531..26226

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ETA8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 84.3
  • Coverage: 230.0
  • Bit_score: 389
  • Evalue 2.90e-105
  • rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR80304.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. D similarity UNIPROT
DB: UniProtKB
  • Identity: 84.3
  • Coverage: 230.0
  • Bit_score: 389
  • Evalue 4.10e-105
Transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 230.0
  • Bit_score: 380
  • Evalue 2.90e-103

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGACGACAACGCAGTTCCCGAACGCAAGCGCGGCTCCGGCGTCAAGATGGTCTACGACCTCTTGCGCGACGAGATCCTCGACCTGAAGCTTGCCCCCGGCAGCCCGATCGACGAGGTGCAACTGGCCGATCGCTTCAAGATGTCGCGCACTCCGATCCGCGAAGCGCTGGTGCGCCTTGCCGGCGAAGGCCTGATCGAGACGCTGCCGAACCGCTCGACCATGGTCTCGAACATCGATTTCCTCAACCTGCACACCTTCTTCGATGCGCTGGTCCTGATGTATCGTGTCACGACGCGGCTGGCGGCGCAATATCACCGCCCCGAGGATCTGGCGACGATCCGCACCTACCACGAGGAGTATGCGGCCGCGGTGAAGGCGCAGGATGCGCTGGCGATGATCGCCACCAACGCCGCTTTTCATTCTGCCATCGCCGATGCAGGGCGCAACCCCTATTTCTCCAGCCTGTTCCGCCGACTGCTGGACGAAGGGCGACGCATCCTGCGGCTCTACTACCAGTCCTATGAGGACCAGTTGCCGCAACGTTTCGTCGACGAGCACCAGGAGATGATCGACGTTATCGCCGCCCGCGACGTCGAGGCCGCAGACCGCATCGGCCGCGAACACGCGGAACAGATCGTCGCGCAGGTGCAGCGGCTTTTCACCCGCAACGAACGCCTCGATATTCAGCTTTGA
PROTEIN sequence
Length: 232
MDDNAVPERKRGSGVKMVYDLLRDEILDLKLAPGSPIDEVQLADRFKMSRTPIREALVRLAGEGLIETLPNRSTMVSNIDFLNLHTFFDALVLMYRVTTRLAAQYHRPEDLATIRTYHEEYAAAVKAQDALAMIATNAAFHSAIADAGRNPYFSSLFRRLLDEGRRILRLYYQSYEDQLPQRFVDEHQEMIDVIAARDVEAADRIGREHAEQIVAQVQRLFTRNERLDIQL*