ggKbase home page

SCNpilot_cont_300_bf_scaffold_1164_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(10198..10896)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix type 11 domain protein n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6U714_SINMW similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 233.0
  • Bit_score: 214
  • Evalue 1.00e-52
Uncharacterized protein {ECO:0000313|EMBL:KGD99896.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 220.0
  • Bit_score: 280
  • Evalue 1.60e-72
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 233.0
  • Bit_score: 214
  • Evalue 2.80e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCGCGAACGGTGCGGATGTTCGAGATCGTGCAGATGCTGCGCGCCGCGCGCGCGCCGCTGACGGCGCAAAGCATGGCGACGCGGCTGGAAGTCACGCGTCGCACCATCTATCGCGATATTGCCGCACTTCAGGCATCCGGCGTCCCGGTCGAGGGTGAAGCCGGCATCGGCTATCTGCTGCGCGGCGCTCTCGATCTGCCGCCGATGCGCTTCACCGCCGACGAGATGGAGGCGATCGTCGTCGGCCTTTCGCTCGTCGGGCGCACCGGCGATGCGCTGCTGGCGGCGGCCGGCGAAAGCGCGCTCGCCAAGATCGCCGACGCCGCGCCACCGGGCGGTCCCTGCCTCGATCTCGGCGGCACGCTGGTTTCCGGCTGGCACGCGATCCCGCCGGGCGCCACCGAGGCCCGGCTCCTGCGCCGGGCGATCCGCGACGAACGCAAGGTGCGGCTTGCCTATCGCGACGCCGAGGACCGCGTCACGGAACGCATTGTCTGCCCGCTCGCCATGCTCTATTATGTCGATTGCCTGTTGCTGGCGGCTTACTGCGAATTGCGTGGCGACTTCCGGCATTTTCGCCATGATCGCATCGAGCGCTGCGAGCCGCTGGACATGTCGTTCGCGGCCCATGGGCACGCCTTGCGCCGCCGCTGGCGGGCGCAGAACCGGGAAAAGATTCCCGCCATGAGCGGCTGA
PROTEIN sequence
Length: 233
MARTVRMFEIVQMLRAARAPLTAQSMATRLEVTRRTIYRDIAALQASGVPVEGEAGIGYLLRGALDLPPMRFTADEMEAIVVGLSLVGRTGDALLAAAGESALAKIADAAPPGGPCLDLGGTLVSGWHAIPPGATEARLLRRAIRDERKVRLAYRDAEDRVTERIVCPLAMLYYVDCLLLAAYCELRGDFRHFRHDRIERCEPLDMSFAAHGHALRRRWRAQNREKIPAMSG*