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SCNpilot_cont_300_bf_scaffold_1258_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 11963..12970

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain n=1 Tax=Rhizobium sp. CF122 RepID=J2IM51_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 316.0
  • Bit_score: 460
  • Evalue 1.20e-126
  • rbh
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain {ECO:0000313|EMBL:EJL49793.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphap similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 316.0
  • Bit_score: 460
  • Evalue 1.60e-126
glxA; HTH-type transcriptional regulator glxA similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 320.0
  • Bit_score: 450
  • Evalue 5.70e-124

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Taxonomy

Rhizobium sp. CF122 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGACGATTTCGGTCCCGAAACCTGTCGGCGTCGATATTGCGGAGCGCAAGCTCAGGGTCGGCTTCGTGCTCGCCCGGTCGTTCACGCTCTCCGCCTTCGCGCTGTTCGTCGATACGCTGCGCCTGGCGAGCGACGAGCTCGATCGCTCTGGCCGCGTGCTGGCTGATTGGCAGGTGCTGAGCAGCACCCGCCATCTGATTTCGTCCAGCTGCGGCGTGCAGGTGGCGCCGACCTCCGATCTCGTCGATCCCTCCCAATTTCAATACATCGTCGTCGTTGGCGGCCTGCTGACCGTCAAGGAGCCGGTCGATAGCCAGACGCTGACCTATCTCAGGCGCGCCAGCGCCGCCAACGTGCCGCTGATCGGCGTCTGTACCGGCACCTTCATCCTGGCCGAAGCCGGCTTGATGAAGCAGCACCATACCTGCGTGAGCTGGCTGCATGTGCAGGCGTTCCGCGAACGTTTTCCCGACCACAAGGTGCGCTCGGACCGGATCTACAGCCTCGACCGCAATCGCGGCTCTTGTGCCGGCGGCTCCAGCACCGCAGACATGGCCGCGGCACTGGTGCGGCGCTATATCAGCCGCGCCGCGGAAAAGAACGCGCTGGAAGTGCTGCAGATCGAGAAGGCGCGTTCGCCCTTCGACATCCAGCCACGCCGCCCGCTGGCGATCGAATGTCAGGACAGCCGCATCAAATCCGTGCTGCTGTTGATGGAAGGCCATCTCGACGGTGGCTTGACCATGGCCAAGCTCGCCGCCTCGGCGCGGCTGTCACGCCGCCAGCTCGAACGGCTGTTCATGAACGAAGTCAAGATGTCGCCGATGGTGGTCTACAAGAAGGTGCGCATGGAGCACGCCAAGGTGCTCCTTTTGAAATCCAAGGCGCCGCTGATCGAGATCGCGCTGGAGACGGGTTTTGCCAGCGCCTCGCATTTCACCCGTGTCTTCAAGAGCATCTATGGTATGACCCCAACCGACTTGCGCACCGGCGCACGCGCCGCGTAA
PROTEIN sequence
Length: 336
MTISVPKPVGVDIAERKLRVGFVLARSFTLSAFALFVDTLRLASDELDRSGRVLADWQVLSSTRHLISSSCGVQVAPTSDLVDPSQFQYIVVVGGLLTVKEPVDSQTLTYLRRASAANVPLIGVCTGTFILAEAGLMKQHHTCVSWLHVQAFRERFPDHKVRSDRIYSLDRNRGSCAGGSSTADMAAALVRRYISRAAEKNALEVLQIEKARSPFDIQPRRPLAIECQDSRIKSVLLLMEGHLDGGLTMAKLAASARLSRRQLERLFMNEVKMSPMVVYKKVRMEHAKVLLLKSKAPLIEIALETGFASASHFTRVFKSIYGMTPTDLRTGARAA*