ggKbase home page

SCNpilot_cont_300_bf_scaffold_1258_16

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 16202..19393

Top 3 Functional Annotations

Value Algorithm Source
transporter n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00038292C2 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 999.99
  • Bit_score: 1823
  • Evalue 0.0
Putative efflux protein {ECO:0000313|EMBL:GAK70058.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 999.99
  • Bit_score: 1801
  • Evalue 0.0
mexF; AcrB/AcrD/AcrF family protein similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 999.99
  • Bit_score: 1796
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium rubi → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3192
ATGAACATCTCACGGTTTTTCGTCGACCGCCCGGTCTTTGCCGGTGTCCTGTCGCTGCTGATCGTCATCGCCGGCCTGATCGGCATGCGCTCGCTCCCGATTTCCGAATATCCCGAAGTCGTGCCGCCTTCCATCGTCGTGCGGGCGCAATATCCGGGCGCCAACCCGAAGGTGATCGCCGAGACGGTGGCGACGCCGCTGGAAGAGCAGATCAACGGCGTCGAGGACATGCTCTACATGTCCAGCCAGGCGACCGCCGACGGCGTCATGACGCTGACGGTCACCTTCGCGCTCGGCACCGATCCCGACAAGGCGCAGCAGCTCGTGCAGAACCGCGTCAGCCAGGCCGAGCCGCGCCTGCCGGCGGAGGTGCGCGCCCTCGGCGTCACCACGGTCAAGAGTTCGCCGGACCTGATGATGGTCATCCATCTCTCCTCGCCGGACAATCGCTACGACATCACCTATTTGCGCAACTACGCCGTGCTCAACATCAAGGACCGGCTCGCCCGCATCGACGGCGTCGGCCAAGTGCAGATCTTCGGCTCGGGCGATTATTCGATGCGCATCTGGATCGATCCGCAGAAGGCGGCCGAGCGTGGCCTTTCAGCCAGCGACGTCGTTGCTGCCATCCGCCAGCAGAATGTTCAGGCCGCCGCCGGCGTCATCGGCGCCTCGCCGAACCTTGACGGCATCGACCTCCAGCTGTCCGTCAATGCGCAAGGACGTCTGCAATCGCCGGAGGAATTCGGCCGCATCATCGTCAAGAGCGGTGCAAACGGCGCGATCACCCGGCTTTCGGATGTCGCCCGCATCGAACTCGGCGCTGCCGACTATTCGCTGCGCTCGCTGCTCGACAACAAGCAGGCGGTCGCCATCCCCGTCTTCCAGGCGCCGGGCTCGAATGCCATCGAGATCTCCGACCAGGTGACCGCGACGATGAACGAGCTGCAACTCGCCATGCCCGAAGGCGTGCGTTACGACATCGTCTACGACACCACGCAGTTCGTGCGTGCCTCCATCGACAAGGTCGTGCATACGCTGCTCGAAGCGGTGGCGCTGGTCGTGCTGGTCGTCATCCTCTTCCTGCAGACCTGGCGCGCCTCGATCATTCCGCTGCTCGCCGTCCCGGTCTCGATCATCGGCACTTTCGCCGTGATGTATGCCTTCGGTTTCTCGATCAATGCGCTCAGCCTGTTCGGACTGGTGCTGGCAATCGGCATCGTCGTCGATGATGCCATCGTCGTGGTCGAAAACGTCGAGCGCAATATCGAGAACGGGCTTTCGCCGCGTGAGGCCACCTATCAGGCGATGCGCGAAGTCTCCGGCCCGATTATCGCGATTGCGCTGGTGCTGGTCGCGGTCTTCGTGCCGCTCGCCTTCATTACCGGGCTTTCCGGCCAGTTCTATCGCCAGTTCGCGCTGACCATCGCTATCTCGACGGTGATTTCAGCGATCAATTCGCTGACGCTGTCGCCGGCACTGTCGGCGCTGCTGCTCAGGGGCCATCATGCGCCGAAGGACTGGCTGACGCGTGTCATGGACCGGACGCTCGGCTGGTTCTTCCGCGGCTTCAACGGCGCCTTCGGCGCCAGCTCGAATGCCTATGGCCGTGGCGTCGGTAAGATCCTGTCGCGCAAAAGCATCATCATGATGGTCTATCTCGTGCTCGCCGGTACCACCTACCAGCTTTTCCAGGCGGTCCCCGGCGGCTTCGTGCCGGCGCAGGACAAGCAATATCTGATCGGTTTCGCCCAGCTTCCCGATGCCGCGACCCTCGACCGCACCGAGGACGTCATCCAGAGGATGAGCGATATCGTGCTGGCCCAGCCGGGCGTCGAACATGCCATCGCTTTCCCCGGCCTGTCGATCAACGGTTTTACCAACGGCTCGAATGCCGGCATCGTCTTCGTGGCGCTCGCCCCGTTCGAGGAGCGCACCACGCCGGAGCTTTCGGCGGGCGCCATCGCCATGCAGCTGAACCAGAAATTCGGCGCTATCCAGGATGCCTTTATCGCCATGTCCCCGCCGCCGCCCGTTCAGGGGCTCGGCACGACCGGCGGCTTCAAGTTGCAGATCGAGGATCGCGCCGGCCTCGGCTACCAGGCGCTCGACGAGGCGACCAAGGCGTTTCTCGCGAAAGCCTATCAGGCTCCGGAGCTTGCCGGCCTGTTCTCCAGCTTCCAGATCAACGTGCCGCAACTCTATGCAGATCTCGACCGCGAGAAGGCCGAACAGCTCGGCGTCTCGGTCACCGATGTCTTCGAGACGCTGCAGATCTATCTCGGCTCGCTTTATGTGAACGACTTCAACGCCTTCGGCCGCACCTACAGCGTGCGTGTGCAGGCGGATGCGAAATTCCGCGCCCGCTCCGAGGATATCGGCGCGCTGAAGGTCCGCTCGCAATCGGGTCAGATGATCCCGCTGTCGACGCTGCTCAAGGTCGAGGCGACGACCGGGCCGGAACGCACCACGCGCTACAACGGCTTCCTCGCCGCCGACATCAATGGCGGCCCGGCGCCGGGTTTCTCCTCGGGGCAGGCGCAGGCGGCCATCGAGCGCATCGCGGCCGAGACCCTGCCCAAGGGCATCGGCTTCGAATGGACCGACCTGACCTACCAGCAGATCCTCGCCGGCAGTTCGGGCATCCTCGTCTTCCCGCTCGCCTTGCTGCTCGTCTATCTGGTGCTCGCCGCCCAGTATGAAAGCCTGACCCTGCCGCTGGCGATCATCCTGATCGTGCCGATGGGTGTGCTCGCGGCGTTGACCGGCGTGTGGCTGACGGGTGGGGACAATAATATCTTCACCCAGATCGGGTTGATCGTGCTGGTGGGGTTGTCGGCGAAGAACGCGATCCTGATCGTCGAATTCGCCCGCGAGCTGGAATTTGCCGGACGCTCGCCGGTGCAGGCGGCGATCGAAGCCAGCCGGCTGCGCCTGCGACCGATCCTGATGACCTCGGCCGCCTTTATCATGGGCGTGGTGCCGCTGGTCACGTCGACCGGCGCGGGTGCGGAAATGCGCGCGGCAATGGGCGTCGCCGTCTTCTCCGGCATGATCGGCGTCACGGTGTTCGGCATCTTCATGACACCGGTCTTCTACGTGCTGGTGCGACGTCTTGCCGGCAACCGGCCGCTGCAGCATCACGGCGCGGTTATAGCGCCCACAGCGCAGCATCCGATGGCCGCCGAATAG
PROTEIN sequence
Length: 1064
MNISRFFVDRPVFAGVLSLLIVIAGLIGMRSLPISEYPEVVPPSIVVRAQYPGANPKVIAETVATPLEEQINGVEDMLYMSSQATADGVMTLTVTFALGTDPDKAQQLVQNRVSQAEPRLPAEVRALGVTTVKSSPDLMMVIHLSSPDNRYDITYLRNYAVLNIKDRLARIDGVGQVQIFGSGDYSMRIWIDPQKAAERGLSASDVVAAIRQQNVQAAAGVIGASPNLDGIDLQLSVNAQGRLQSPEEFGRIIVKSGANGAITRLSDVARIELGAADYSLRSLLDNKQAVAIPVFQAPGSNAIEISDQVTATMNELQLAMPEGVRYDIVYDTTQFVRASIDKVVHTLLEAVALVVLVVILFLQTWRASIIPLLAVPVSIIGTFAVMYAFGFSINALSLFGLVLAIGIVVDDAIVVVENVERNIENGLSPREATYQAMREVSGPIIAIALVLVAVFVPLAFITGLSGQFYRQFALTIAISTVISAINSLTLSPALSALLLRGHHAPKDWLTRVMDRTLGWFFRGFNGAFGASSNAYGRGVGKILSRKSIIMMVYLVLAGTTYQLFQAVPGGFVPAQDKQYLIGFAQLPDAATLDRTEDVIQRMSDIVLAQPGVEHAIAFPGLSINGFTNGSNAGIVFVALAPFEERTTPELSAGAIAMQLNQKFGAIQDAFIAMSPPPPVQGLGTTGGFKLQIEDRAGLGYQALDEATKAFLAKAYQAPELAGLFSSFQINVPQLYADLDREKAEQLGVSVTDVFETLQIYLGSLYVNDFNAFGRTYSVRVQADAKFRARSEDIGALKVRSQSGQMIPLSTLLKVEATTGPERTTRYNGFLAADINGGPAPGFSSGQAQAAIERIAAETLPKGIGFEWTDLTYQQILAGSSGILVFPLALLLVYLVLAAQYESLTLPLAIILIVPMGVLAALTGVWLTGGDNNIFTQIGLIVLVGLSAKNAILIVEFARELEFAGRSPVQAAIEASRLRLRPILMTSAAFIMGVVPLVTSTGAGAEMRAAMGVAVFSGMIGVTVFGIFMTPVFYVLVRRLAGNRPLQHHGAVIAPTAQHPMAAE*