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SCNpilot_cont_300_bf_scaffold_1335_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(9356..10138)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CT16_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 260.0
  • Bit_score: 445
  • Evalue 5.10e-122
  • rbh
ABC-type spermidine/putrescine transport system permease component II {ECO:0000313|EMBL:EYR78088.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sh similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 260.0
  • Bit_score: 445
  • Evalue 7.10e-122
ABC transporter permease protein, putative similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 260.0
  • Bit_score: 443
  • Evalue 3.20e-122

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGCCGCTGAAGCTCACCCGCGCGGTTTTCGCGTCGCTGACGGTGCTGTTTCTCATCGCGCCGCTCATCGCCATCCTGCCGCTCGCCTTCACCTCGTCCGTCATCCTCACCTATCCGATCCCGTCCTGGTCGCTGCGCTGGTTCGAGGAACTGTTTACGGCGGACGCCTGGCGGCGGGCGATCGTCAACAGCCTGATCATCGGCGGCGGCACGACGGCGGTGGCGACCGCGCTCGGCACCGCCGCCTCGCTCGGCCTGCGCAATCATCTGCTGTTCTTTCGCGGATCGTTCCGCACGCTGTTTCTGCTGCCCATGGTGGTGCCGGCCGTGGTGCTCGGTGTCGGGTTGCAGGTGCTGCTCGCGCGCCTCGGCCTGGCGAACAGCTATGCCGGCGTCATCATCGCCCATACGGTCGTGGCCGTGCCTTTCGTCGTCGTCAGCGTCACCGGGGCGCTTTCGGGCATCGACAAGCGGGTGGAGCTTGCCGCGCAAAGCCTCGGCGCGGCGCCGGCCACCGTCTTCCGGCGGGTGACCTTGCCGCTCGCCATGCCCGGCGTGCTCTCCGGCGCGGTGCTGGCCTTCGCGACCTCGCTGGACGAGGTGGTGCTGACGCTTTTCGTCGCCGGCCCGAACCAGCGGACGCTGGCGCGGCAGATGTTTTCCAGCATCCGCGAGAATATCAGCCCGGCCATCGCCGCGGCCGCCTTCCTGTTCATCGCCGCCACGGTGGCGATCGGCCTCGTCGTGGTGCTGTCGCGCTCGATGATGGCGAAGCGGCGCTGA
PROTEIN sequence
Length: 261
MPLKLTRAVFASLTVLFLIAPLIAILPLAFTSSVILTYPIPSWSLRWFEELFTADAWRRAIVNSLIIGGGTTAVATALGTAASLGLRNHLLFFRGSFRTLFLLPMVVPAVVLGVGLQVLLARLGLANSYAGVIIAHTVVAVPFVVVSVTGALSGIDKRVELAAQSLGAAPATVFRRVTLPLAMPGVLSGAVLAFATSLDEVVLTLFVAGPNQRTLARQMFSSIRENISPAIAAAAFLFIAATVAIGLVVVLSRSMMAKRR*