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SCNpilot_cont_300_bf_scaffold_1893_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(5209..5454)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S21 n=1 Tax=Rhizobium sp. RepID=L0NF12_RHISP similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 81.0
  • Bit_score: 140
  • Evalue 6.40e-31
rpsU; 30S ribosomal protein S21 similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 81.0
  • Bit_score: 139
  • Evalue 5.20e-31
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 79.0
  • Bit_score: 139
  • Evalue 1.50e-30

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 246
TTGCAAGTTCTCGTCAGGGACAACAACGTCGATCAAGCCCTCCGCGTTTTGAAAAAGAAAATGCAGAGAGAAGGGCTTTTCCGGGAAATGAAGGCACGGAGCGCTTATGAAAAGCCTTCCGAAAAGAGAGCGCGGGAAAAAGCCGAGGCCGTCCGGCGCACCCGGAAGCTGGCCCGCAAGAAGGCGCAGCGCGAGGGGCTCCTGCCCGCTCCCAAGAAGAAGCCGCTGCCAGGCCGGGCGAAGTGA
PROTEIN sequence
Length: 82
LQVLVRDNNVDQALRVLKKKMQREGLFREMKARSAYEKPSEKRAREKAEAVRRTRKLARKKAQREGLLPAPKKKPLPGRAK*