ggKbase home page

SCNpilot_cont_300_bf_scaffold_1798_7

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(6088..7662)

Top 3 Functional Annotations

Value Algorithm Source
TPR domain protein n=2 Tax=Arthrospira platensis RepID=D4ZXQ2_ARTPN similarity UNIREF
DB: UNIREF100
  • Identity: 27.8
  • Coverage: 281.0
  • Bit_score: 113
  • Evalue 9.20e-22
Uncharacterized protein {ECO:0000313|EMBL:KKC31894.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.3
  • Coverage: 488.0
  • Bit_score: 205
  • Evalue 1.90e-49
TPR domain protein similarity KEGG
DB: KEGG
  • Identity: 27.8
  • Coverage: 281.0
  • Bit_score: 113
  • Evalue 2.60e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia psychrophila → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1575
ATGTCTGAGATCGATCATTCGGCATTCGACGCAGAACTGACGCAATCGCCGCGGCTTCGCTGGTGGACGCGGCTGATACGCCTGATCGAAGGCAAAACCACACTCATCCGTTCCATATTGTTCAACGTGCTGGTCGTTCTGGCGATGATCGTTATTGTCCCCGTAATGCTGTCCGAACTAGCAAGTGACCGAGTGACGATCACGACGATTTCCGTTCCGGCCGCGCTGGAGGAGAAGGGGCTGAACGGCACCGTGATCGGCAACCGGCTCTGGGACGCCTGGTCGAAGGTGACGGACGAGGTGAAAGCCGCGAAGGAGACGCGCGATGTCCTGCCGAGTTCGCAGCGCATCGAGTTTTCGATCCCGGACTCGGGCATTTCGTTCGAATCGCTGATCCATCATGTGCGCGCCTTCTTCGGTCGCGCTGAGACCCGAATATCGGGAGAGCTGACCTGCGTTGCAGATCCCTGCACGATCGAGAACAGCGCGCTCAGGCTGCGCATCATCGACAAGGAAATCCATGTGATCGATCTGCCGCCGCCGGGGAACGGCGATATCAATCTCTGGTTTCGCAAGGCCGTGGCGGAAGCGCTGATGTTTATCGATCCGGTGAGGGGCATTCTGGCGCTGCGTTCCGAAAGCGAAACCCGCACGATCGCCGAATTGCGCCGTCTGGCCCGCGAAGGCCATCCGGATGCCGCATGGGCGCTGACGGTCGCCGCGCAACTCACCACCGACCGCAAGGAATACGACAAGGCGCGGGCGCTTGCCGATGAGGCGCTCAGACTGGACAAGCATTTCGTCGATGCGCTGATCACCCGTGCGGCCGCCGAACTGGGCGCAGGTGACGTCGAGGAGGCGCGCAAATCGATTGCCGAGGCTCTGCGTCTATCGCCACGCAATGCGCAAGCCTATAAGTGGCGCGGGGAAATCGCAGCCCATGCCGGAGACCACAAGGCGGCGGCCGCGGATCTGGCCAGAGCTGTGAGCCTGCAGCCGCAGGATATCGATCTTCAATTCCGTCTGGGCATGCTGCAACGGGATATCGGAGATCCGGTCGCGGCGGCAATGACCTTCGACGGCATGCTCGAAATCGACCCGAATTCCATTATTGCCCATCAGGCATTGTCGCTTATGGCGATCGAGAAGGGCGACATTGCCGGTCTGGTCAGCCACAAGATGGAGATCGCCCGCCTGGCGCCGAAGGACGCCGATGCCTTGGCGCAGCTCGGCAATGCCCAGATGCTGGCCAAGCAATTCGATACGGCGCGGGCAAGCTTCGAGAGCGCGGTCCAGCTCGCTCCCGCGCAGCCCACCTATCGTTTGGGACTTGGCGATGCGGCGCTTGCCCAGCAAGACGGCAGCGGCGCTCTCGCCGCATTCAAGGATGTGCAGCGGCTCGATCCGCTCGATCGGCGCATCCTGTTTCGTCTTGGCCGCGCCTTTATGATGCTAGGCCAGACCGAACAGGCGCATGCCGCCTTCCGCAGCTACATCGAGGCATTTCCGCAGGAGCCGGACGCCATTATCGCGCACGCCCTTATCGGGGAAAATTCAGCAGAATCAGGAAACTAG
PROTEIN sequence
Length: 525
MSEIDHSAFDAELTQSPRLRWWTRLIRLIEGKTTLIRSILFNVLVVLAMIVIVPVMLSELASDRVTITTISVPAALEEKGLNGTVIGNRLWDAWSKVTDEVKAAKETRDVLPSSQRIEFSIPDSGISFESLIHHVRAFFGRAETRISGELTCVADPCTIENSALRLRIIDKEIHVIDLPPPGNGDINLWFRKAVAEALMFIDPVRGILALRSESETRTIAELRRLAREGHPDAAWALTVAAQLTTDRKEYDKARALADEALRLDKHFVDALITRAAAELGAGDVEEARKSIAEALRLSPRNAQAYKWRGEIAAHAGDHKAAAADLARAVSLQPQDIDLQFRLGMLQRDIGDPVAAAMTFDGMLEIDPNSIIAHQALSLMAIEKGDIAGLVSHKMEIARLAPKDADALAQLGNAQMLAKQFDTARASFESAVQLAPAQPTYRLGLGDAALAQQDGSGALAAFKDVQRLDPLDRRILFRLGRAFMMLGQTEQAHAAFRSYIEAFPQEPDAIIAHALIGENSAESGN*