ggKbase home page

SCNpilot_cont_300_bf_scaffold_1952_1

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 1..528

Top 3 Functional Annotations

Value Algorithm Source
Oxygen-dependent choline dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00750, ECO:0000256|SAAS:SAAS00054588}; Short=CDH {ECO:0000256|HAMAP-Rule:MF_00750};; Short=CHD {ECO:0000256|HAMAP-Rule:MF_00750};; EC= similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 175.0
  • Bit_score: 342
  • Evalue 4.40e-91
betA; choline dehydrogenase (EC:1.1.99.1) similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 175.0
  • Bit_score: 336
  • Evalue 6.30e-90
choline dehydrogenase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037E37F8 similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 175.0
  • Bit_score: 342
  • Evalue 1.80e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium mesoamericanum → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
CAGGTGCATGTCGGCTATAACCTGTCGAAATCGCGCGGCAATGTCACCTTGCGTTCTTCGGATCCGAATGCCGAGCCGGTGATCCGCTTCAATTATATGAGCCACCCGGAAGACTGGGAAAAATTCCGCCACTGCGTGCGCCTCACCCGCGAGATCTTCGGCCAGAAGGCTTTCGACGCGTTTCGCGGGCCGGAAATCCAGCCGGGCGAATCCGTCCAGAGTGACGAGCAGATCGACGCCTTCCTGCGCGAGCATCTGGAAAGCGCCTATCACCCCTGCGGTACCTGCAAGATGGGCGCGGCGACGGACCCGACGGCGGTCGTCGATCCCGAATGCCGGGTCATCGGCGTCGAAGCCTTGCGTGTCGCCGACAGCTCGATCTTCCCGCATGTGACCTATGGCAACCTCAACGGCCCGTCGATCATGACCGGCGAAAAGGCCGCCGACCACATTCTCGGCAAGCAGCCCCTGCCCCGCTCCAACCAGGAACCGTGGATCAATCCGCGCTGGCAGGAAAGCGACCGGTGA
PROTEIN sequence
Length: 176
QVHVGYNLSKSRGNVTLRSSDPNAEPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDAFRGPEIQPGESVQSDEQIDAFLREHLESAYHPCGTCKMGAATDPTAVVDPECRVIGVEALRVADSSIFPHVTYGNLNGPSIMTGEKAADHILGKQPLPRSNQEPWINPRWQESDR*