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SCNpilot_cont_300_bf_scaffold_2506_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 6303..8033

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD2 components (Relaxase)-like protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VCL8_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 89.8
  • Coverage: 576.0
  • Bit_score: 1046
  • Evalue 0.0
  • rbh
Type IV secretory pathway VirD2 components (Relaxase)-like protein {ECO:0000313|EMBL:ABQ70034.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 576.0
  • Bit_score: 1046
  • Evalue 0.0
Type IV secretory pathway VirD2 components (relaxase)-like protein similarity KEGG
DB: KEGG
  • Identity: 89.8
  • Coverage: 576.0
  • Bit_score: 1046
  • Evalue 0.0

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
ATGAGCGGCGACGAGGATTTCCGCATCCGGCCTGGCCGCATCCGTTCACGCGGCGGCCAGCGCGCGCTGCCCGTCATCGCCCAGGCGCTCGCCGCCGCGCAGCGGGCCGGCGGCTATGTCTCGCGCCGCGGCCGGATCATCGCGCCGGGCCGCTCGACCTTCGGCCGGGGCCGGGTCGCCAGCCTGCGCGCCACGCACCGGCTCGGGCACCGCTCGCGCCAGGTTGTCGTCAAGGCGCGCGTGGTCAAGCATGGCGGCCGCGCCTCGCTCGCGGCCCACCTCGGCTATCTGCAACGCGATGGCGTCACCCGCGACGGCGAGAAGGGCGTGCTGTTCGGCGCGGAAAGCGAGAGCCTTGATCGCAACGAGTTCGCGGCCCGCTGCGAGAACGACCGGCACCATTTTCGCTTCATCGTCTCGCCCGAGGACGCGCCGCAGATGGGCGACCTCAAGGGCTTCATCCGCGAGCTGATGACGCGGATGGAAAAGGATCTCGGCACCCGCCTCGACTGGCGGGCCGTCGAGCACTGGAACACCGACAACCCCCACATCCATGTCATCGTGCGCGGCGTCGGCGAGGACGGGCAGAACCTCGTCATCTCGCGCGACTATATCCGCGAGGGGATGCGGGCGGTCGCACGCGAGATCGTCACCCGCGAGCTGGGCCTGCGCAGCGACCTCGACATCCATGCCTCGCTGGAGCGGCAGGTCGAGGCCGAACGCTGGACCAAGATCGACCGCGACCTTGCGCGCACCCTTCAGCGCGAGGGCGTCATCGACACGGCGCCTGAGCCGGGCGTGCGGCCGGACGGCGACCATGCGCTACGGATGGGACGGCTGCGCAAGCTGGAACGCCTCGGCCTCGCCAGCGAGATCGCGCCCGGCCAGTGGACGCTGGCGGACGAGGCGCAGCCGGCCCTGCGCGAGCTGGGCGAACGCAACGACATCATCAAGCGGATGCACAAGGCGATGAGCGACCGCGGCATCGACCGCGGCGCCGCCAGCTATGTGCTCGCGCCCGATCCCGCCCAGCCGGTGATCGGCCGGCTGGTCGATCGCGGCCTCCATGACGAACTGATCGGCCGGGCCTATGCGATCGTCGACGGGATCGACGGGCGCACCCACCACGTCCAGCTTCCTAACATCGAGGCGACGGGCGATTGCCGGCCCGGCGCCATCGTCGAGCTGCGCCACTTCGAGGACAGCAAGGGCCGCCAGCGCGTGGCGCTCGCCGTGCGCTCGGACATGGACTTGTCGGCGCAGGTCCGCGCGCCGGGCGCCACCTGGCTCGACCGCCGCAACCTGGCGAGCGACGGCCGCGATCTTGGCGGCGGGTTCGGAACCGAGGTGCGCGCCGCGATGGAAGCGCGCGCCGAGCATCTCGCCGACGAGGGCCTGGCGCGGCGGCAGGGCCAGCGCATCATCTTCGCGCGCAACCTGCTCGACACGTTGAAGCGCCGCGAACTCGACGCGACGGCCAAGGAGCTGTCGGCCGAGATCGGCCTGCCGCACACGCCCTCCAAGGCCGGCGAATATGTCGCCGGCACCGTGCGCCAGCGCCTGACGCTCGCTTCGGGTCGCTTCGCCATGATCGACGACGGCCTGGGCTTCCAGCTCGTTCCCTGGTCCCCCTCGCTCGACCGCCAGATCGGCAAGCACATCTCTGGCGTCATGCGCGGCGACGGCGGCGTGGATTGGTCGCTCGGCCGTGGCCGGGGGCTGGGCCTGTGA
PROTEIN sequence
Length: 577
MSGDEDFRIRPGRIRSRGGQRALPVIAQALAAAQRAGGYVSRRGRIIAPGRSTFGRGRVASLRATHRLGHRSRQVVVKARVVKHGGRASLAAHLGYLQRDGVTRDGEKGVLFGAESESLDRNEFAARCENDRHHFRFIVSPEDAPQMGDLKGFIRELMTRMEKDLGTRLDWRAVEHWNTDNPHIHVIVRGVGEDGQNLVISRDYIREGMRAVAREIVTRELGLRSDLDIHASLERQVEAERWTKIDRDLARTLQREGVIDTAPEPGVRPDGDHALRMGRLRKLERLGLASEIAPGQWTLADEAQPALRELGERNDIIKRMHKAMSDRGIDRGAASYVLAPDPAQPVIGRLVDRGLHDELIGRAYAIVDGIDGRTHHVQLPNIEATGDCRPGAIVELRHFEDSKGRQRVALAVRSDMDLSAQVRAPGATWLDRRNLASDGRDLGGGFGTEVRAAMEARAEHLADEGLARRQGQRIIFARNLLDTLKRRELDATAKELSAEIGLPHTPSKAGEYVAGTVRQRLTLASGRFAMIDDGLGFQLVPWSPSLDRQIGKHISGVMRGDGGVDWSLGRGRGLGL*