ggKbase home page

SCNpilot_cont_300_bf_scaffold_2506_17

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 12237..14657

Top 3 Functional Annotations

Value Algorithm Source
UPI0003D67AA4 related cluster n=1 Tax=unknown RepID=UPI0003D67AA4 similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 805.0
  • Bit_score: 1428
  • Evalue 0.0
Conjugal transfer protein TrbE {ECO:0000313|EMBL:ETI62668.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingob similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 805.0
  • Bit_score: 1428
  • Evalue 0.0
conjugal transfer protein TrbE similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 801.0
  • Bit_score: 1380
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. C100 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2421
ATGCCCTGGGCCGCGTTGGTCGCCGAGGGCGTCGTCCTCAACAGGGACGTCTCGTTCCAGCGCACCGCGCGCTTCCGCGGTCCCGATCTCGACAGCGCCACGCCCGCCGAGCTGGTCGCCACCACCGCGCGGCTCAACAGCGCGCTGCGCCGTCTCGGCTCGGGCTGGGCGATCTTCGTCGAGGCGCAGCGCACGCCCGCGCTCGATTATCCCGACTCCATCTTTCCCGATCCGGTCTCCGCGCTGGTGGACATGGAGCGGCGTGAACAGTTCCGCGAGGAAGGCGCGCATTTCGAGAGCCGCTATTACCTGACGCTCTTGTGGATGCCGCCGGCCGAGGACGCGGCCCGGGCCGAAGGCTGGCTCTACGAGGGCCGCGCCAATACCGGCGTCGATCCGTGGGAGCTGCTCAAGAGCTTCACCGACCGCAGCGACCGGGTGCTGGGCCTGGTCGAAGGCTTCGTGCCCGAAGTCCGCTGGCTCGATGACGCCGAGACCCTGACCTATCTGCACAGCACGATCTCGACCCGGCGCCAGCGCGTGCGCGTGCCCGAGACGCCAATGTATCTGGACGCGCTCCTGGCCGACGAGCCGCTCACCGGCGGACTCGAACCGCGCCTGGGCGAGCACCATCTGCGCACGCTCACCATCATCGGCTTTCCGAGCGTCACCTTCCCCGGTCTGCTCGACGAGCTGAACCGGCTGGCCTTCGAGTATCGCTGGTCGACGCGCGCGATCATGCTCGACAAGACCGATGCGACCAAGCTGCTGACCAGGATTAGGCGGCAATGGTTCGCCAAGCGCAAGTCGGTCGCCGCCATCCTCAAGGAGGTGATGACCAACGAGGCGTCGGTCCTGATGGACAGCGACGCTTCAAACAAGGCAGCCGACGCCGACACTGCCCTGCAGGAATTGGGCGCCGACTATGCCGGCATGGCCTACGTCACCGCGACGGTGACGGTATGGGACCGCGATCCCGCCGTGGCGGCCGAGAAGCTGCGGCTCGCCGAGAAGGTCATCCAGGGCCGCGACTTCACCGTCATCCCCGAGGGCATGAACGCGATCGAGGCGTGGCTGGGAAGCCTGCCCGGCCACGCCTACGCCAACGTCCGGCAGCCGCCGGTCTCCACCTTGAATCTGGCCCACATGATCCCCCTCAGCGCCGTGTGGGCTGGGCCGGAACAGGACGAGCATCTGCAAGCGCCCCCCTTGCTGTTCGGCAAGACCGAAGGCTCGACCCCGTTCCGGTTTTCTCTGCATGTCGGCGATGTCGGCCACGAGCTGATTATCGGTCCGACCGGCTCGGGCAAGTCGGTGCTGCTCGCCCTCATGGCGATGCAGTTCCGCCGCTACGAGAACGCCCAGGTCTTCGCCTTCGATTTCGGCGCCAGCATCCGCGCCGCCGCCATCGCCTGCGGCGGCGACTGGCAGGATCTCGGCGGCAGCCTGGCCGAGGACGGTGGCGGCGGGGTCGCGCTGCAACCGTTGGCGCGGATCGACGAGGCGGCCGAGCGCGCTTGGGCCGCCGAATGGCTGGCCGCGATCCTCGCCGCGGAAGGCGCGACGGTCGATCCGCAGGCCAAGGATCATATCTGGTCGGCGCTCACCTCGCTGGCGTCCGCGCCGTGCGCCGAACGGACCCTGACCGGCCTCGCGGTCCTGCTGCAATCGCAGACGCTGAAGCAGGCGCTCGCGCCCTACTGCGTCGGCGGGCCGTGGGGCCAGCTCCTCGACGCCGAATCCGAGCGGCTGGGCGCCTCCGACTTCCAGGCGTTCGAGACCGAGGGGCTCATCGAGAGCAGCGCCGCGCCTGCGGTGCTGACCTATCTCTTCCACCGCATCGCCAGCCGGCTCGATGGCAGCCCGACCCTCATCATCGTCGATGAAGGCTGGCTCGCGCTGGACTCGCCCGCCTTCGTCAAGCAACTCGCCACCTGGCTGGTCACGCTGCGCAAGAAGAACGCCAGCGTCATCTTCGCCACCCAATCGCTGTCGCAGATCGAAGGCAGCCCGGCCACGCCGGCGATCATCGAGAGCTGCAAGACCCGCATCCTGCTCGCCAACGAACGGGCGCTCGAACCGCAGATCGCGGCCATCTACCGCCGCTTCGGCTTGAACGACCGGCAGATTGAGATGCTCGCACGCGCTACGCCGCGGCGCGACTATTACTGCCAGTCACCGCCCGGAAACCGGCTGTTCGAGCTAGGGCTGGGCGAGGTCGCGCTGGCCTTCGCCGCCACCTCGGCCAAGGCCGACCAGCTCGCCATCACCGAGATCATCGAAACCCACGGGGCAGCCGCCTTCGCCGCCGAATGGCTGCGGCATCGCGGCTGCGCCTGGGCCGTCGAGCTGCTGCCGGAACCTGTGTCCGACCGCCAGCCCGAACTTCCCCTCACGCCAGACATGGAGATCACACCATGA
PROTEIN sequence
Length: 807
MPWAALVAEGVVLNRDVSFQRTARFRGPDLDSATPAELVATTARLNSALRRLGSGWAIFVEAQRTPALDYPDSIFPDPVSALVDMERREQFREEGAHFESRYYLTLLWMPPAEDAARAEGWLYEGRANTGVDPWELLKSFTDRSDRVLGLVEGFVPEVRWLDDAETLTYLHSTISTRRQRVRVPETPMYLDALLADEPLTGGLEPRLGEHHLRTLTIIGFPSVTFPGLLDELNRLAFEYRWSTRAIMLDKTDATKLLTRIRRQWFAKRKSVAAILKEVMTNEASVLMDSDASNKAADADTALQELGADYAGMAYVTATVTVWDRDPAVAAEKLRLAEKVIQGRDFTVIPEGMNAIEAWLGSLPGHAYANVRQPPVSTLNLAHMIPLSAVWAGPEQDEHLQAPPLLFGKTEGSTPFRFSLHVGDVGHELIIGPTGSGKSVLLALMAMQFRRYENAQVFAFDFGASIRAAAIACGGDWQDLGGSLAEDGGGGVALQPLARIDEAAERAWAAEWLAAILAAEGATVDPQAKDHIWSALTSLASAPCAERTLTGLAVLLQSQTLKQALAPYCVGGPWGQLLDAESERLGASDFQAFETEGLIESSAAPAVLTYLFHRIASRLDGSPTLIIVDEGWLALDSPAFVKQLATWLVTLRKKNASVIFATQSLSQIEGSPATPAIIESCKTRILLANERALEPQIAAIYRRFGLNDRQIEMLARATPRRDYYCQSPPGNRLFELGLGEVALAFAATSAKADQLAITEIIETHGAAAFAAEWLRHRGCAWAVELLPEPVSDRQPELPLTPDMEITP*