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SCNpilot_cont_300_bf_scaffold_3656_8

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(6536..7246)

Top 3 Functional Annotations

Value Algorithm Source
L-threonine dehydratase catabolic TdcB {ECO:0000313|EMBL:EYR77399.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EYR77399.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhi similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 236.0
  • Bit_score: 386
  • Evalue 2.10e-104
L-threonine dehydratase catabolic TdcB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX21_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 236.0
  • Bit_score: 386
  • Evalue 1.50e-104
pyridoxal-5'-phosphate-dependent protein subunit beta similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 235.0
  • Bit_score: 374
  • Evalue 2.80e-101

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
CGGCACGACGTTCCCTCGGTGATCATCATGCCCGCCGACGCGCCCCGGCTGAAAATCGAGAATACGCGCGCCTTCGGCGCGGATGTCGTTCTCTACGACCGCGAAAAGGAAGATCGTGACGCCATCGGCGCCCGTTTGTCCGAGGAGCGTGATCTCACCTTGATAAAGCCGTTCGACGACCCGCTGGTCATCGCCGGCCAAGGCACGACCGGCCTCGAAATCGCCGCGCAGGCGGATGAGGAAGGCATTCGGGCGGCCGAGGTTCTGGTGCCCTGCGGCGGCGGCGGACTGAGCGCCGGCATCGCGCTCGCCTTGGAAGCGCACGCGCCGCATTTCACCCTCCGCACCTGCGAGCCCGAGCATTTCGACGATACCGCCCGCTCGCTGCGCTCCGGGACGACCACGCGAAACGCCGCCATCTCCGGCTCCATCTGCGATGCGATATTGACGCCGGAACCCGGCAAGCTCACCTTTCCCATCCTCAAGCGTCTCGCGGCCGCCGGGATCGCGGTGACGGACGAGGAAGCCTTGCGCGCCATGGCGCTCGCCTTCAAGCGTCTGAAAATCGTCGTCGAGCCCGGCGGCGCCGTCGCGTTGGCCGCCGCCTTGTTCCACGGCAAGGCGTTGGAAAGCGACACTGTCATCGCCGTCGCTTCCGGCGGCAATGTCGATACGGCGGTGTTCTCGATGGCGCTCGAACGCTTCGGCTGA
PROTEIN sequence
Length: 237
RHDVPSVIIMPADAPRLKIENTRAFGADVVLYDREKEDRDAIGARLSEERDLTLIKPFDDPLVIAGQGTTGLEIAAQADEEGIRAAEVLVPCGGGGLSAGIALALEAHAPHFTLRTCEPEHFDDTARSLRSGTTTRNAAISGSICDAILTPEPGKLTFPILKRLAAAGIAVTDEEALRAMALAFKRLKIVVEPGGAVALAAALFHGKALESDTVIAVASGGNVDTAVFSMALERFG*