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SCNpilot_cont_300_bf_scaffold_3378_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 1124..1747

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=2 Tax=Agrobacterium RepID=F0L752_AGRSH similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 207.0
  • Bit_score: 345
  • Evalue 4.40e-92
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 196.0
  • Bit_score: 346
  • Evalue 3.60e-92
rplD; 50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 196.0
  • Bit_score: 344
  • Evalue 1.60e-92

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Taxonomy

Rhizobium sp. R1-200B4 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGGATCGTCGTTCGCGATGCTGTCAAGGCTGCAAGGACGCCGGCACGGTCTCCCTGTCCGACACGATCTTCGGTCTGGATCCGCGCGAAGACATCCTCGCACGCATGGTTCGCTGGCAGCTCGCTCGCAAGCAGCAGGGCACCCACAAGACCAAGACCCGCGGTGAGGTTTCCCGCACCGGCGCCAAGATGTACAAGCAGAAGGGCACCGGTCGCGCACGTCACCATTCGGCTCGCGCTCCGCAGTTCCGCGGCGGCGGTCGTGCACACGGCCCGGTCGTTCGTAACCACGAGCATGATCTTCCCAAGAAGGTTCGCGCTCTGGCCCTGCGTCACGCCCTGTCGGCCAAGCTGAAGTCCGAAGGACTGATCATTATCGACGAGCTGGTCGCTTCCGAAGCAAAGACCAAGGCTCTGGTCGGTACGTTCCAGACGCTGGGTCTCACCAACGCCCTCTTCATCGGCGGCGCAGAGTTGGACGCCAACTTCGCACGCGCAGCCCAGAACATTCCGAACATGGACGTTCTGCCGATCCAGGGCATCAATGTTTACGACATTCTGCGTTGCGGCAAGCTCGTCCTGTCCAAGGCTGCAGTTGAAGCTCTGGAGGAGCGGTTCAAATGA
PROTEIN sequence
Length: 208
VDRRSRCCQGCKDAGTVSLSDTIFGLDPREDILARMVRWQLARKQQGTHKTKTRGEVSRTGAKMYKQKGTGRARHHSARAPQFRGGGRAHGPVVRNHEHDLPKKVRALALRHALSAKLKSEGLIIIDELVASEAKTKALVGTFQTLGLTNALFIGGAELDANFARAAQNIPNMDVLPIQGINVYDILRCGKLVLSKAAVEALEERFK*