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SCNpilot_cont_300_bf_scaffold_3378_19

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 8597..9166

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S5 n=5 Tax=Agrobacterium RepID=RS5_AGRT5 similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 189.0
  • Bit_score: 366
  • Evalue 1.70e-98
  • rbh
rpsE; 30s ribosomal protein S5 similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 189.0
  • Bit_score: 366
  • Evalue 4.70e-99
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Ag similarity UNIPROT
DB: UniProtKB
  • Identity: 97.4
  • Coverage: 189.0
  • Bit_score: 366
  • Evalue 2.30e-98

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 570
ATGGCACAGGAAAAGAGAGGCTCTCGCGACGATCGCCAGAGCCGTGAAGAACGCGACAGCGAGTTCGTCGACAAGCTGGTCGCGATCAACCGCGTCGCGAAGGTTGTCAAGGGTGGCCGTCGCTTCGGTTTCGCCGCTCTCGTCGTCGTCGGCGACCAGAAGGGTCGCGTCGGTTTCGGCCACGGCAAGGCCCGTGAAGTGCCGGAAGCGATCCGCAAGGCCACCGAAGCCGCCAAGCGCGAACTGATCTTCGTTCCGCTGCGCGACGGCCGCACGCTGCATCACGACGTCAACGGCCGCCACGGCGCCGGCAAGGTTCTGCTGCGCTCGGCCAAGGCCGGTACGGGTATCATCGCAGGCGGCCCGATGCGCGCCGTTTTCGAAACCCTCGGCGTTCATGACGTCGTTGCCAAGTCGACCGGTTCGTCGAACCCCTACAACATGGTTCGCGCAACCTTCGACGCTCTGAAGCACCAGGTTCATCCGAAGGACATCGCAGCTCAGCGCGGCTTGAAGTACGCCACGCTCCAGGCTCGTCGTGCCGCTTCGGGCAACTCTGCCGAAGAATAA
PROTEIN sequence
Length: 190
MAQEKRGSRDDRQSREERDSEFVDKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRELIFVPLRDGRTLHHDVNGRHGAGKVLLRSAKAGTGIIAGGPMRAVFETLGVHDVVAKSTGSSNPYNMVRATFDALKHQVHPKDIAAQRGLKYATLQARRAASGNSAEE*