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SCNpilot_cont_300_bf_scaffold_3378_26

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 13243..14253

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 336.0
  • Bit_score: 650
  • Evalue 1.10e-183
DNA-directed RNA polymerase subunit alpha n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2P8U1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 336.0
  • Bit_score: 650
  • Evalue 7.90e-184
  • rbh
rpoA; DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 336.0
  • Bit_score: 649
  • Evalue 5.00e-184

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Taxonomy

Agrobacterium albertimagni → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGATTCAGAAGAACTGGCAAGAATTGATCAAGCCGAACAAGGTCGAGTTCACCTCTTCCGGCCGGACGAAGGCGACGCTCGTCGCCGAGCCGCTGGAGCGGGGCTTCGGCCTGACGCTCGGCAACGCGCTGCGTCGCGTTCTGCTGTCGTCGCTGCGCGGCGGTGCCGTCACCGCCGTCCAGATCGACGGCGTGCTGCATGAATTCTCGTCCATTCCGGGCGTGCGCGAAGATGTGACGGACATCGTCCTCAACATCAAGGAAATCGCCATCAAGATGGATGGCGACGATGCCAAGCGCATGGTCGTTCGCAAGCAGGGCCCGGGCGTCGTCACGGCTGGTGATATCCAGACGGTTGGCGACATCGAAATCCTGAACCCGAACCATGTGATCTGCACGCTCGACGAGGGCGCGGAGATCCGCATGGAATTCACCGTCAACAACGGCAAGGGTTACGTTCCGGCGGAACGCAACCGTTCCGAAGATGCGCCGATCGGCCTCATCCCGGTCGACAGCCTGTATTCGCCGGTGAAGAAGGTCTCGTACAAGGTTGAAAACACCCGCGAAGGCCAGGTTCTCGACTACGACAAGCTGACGATGACGATCGAAACCAACGGCTCGATCACCGGTGAAGATGCGATCGCCTTTGCGGCCCGCATTCTCCAGGATCAGCTCGGCGTTTTCGTCAACTTCGACGAGCCGCAGAAGGAAGCCGAGGAAGAAGCCGTCACCGAGCTGGCGTTCAACCCGGCGCTGCTCAAGAAGGTCGACGAGCTGGAGCTTTCGGTCCGTTCGGCCAACTGCCTGAAGAACGACAACATCGTCTATATCGGCGACCTCATTCAGAAGACCGAAGCCGAAATGCTTCGCACTCCGAATTTCGGCCGCAAGTCGCTTAACGAGATCAAGGAAGTTCTCGCTTCCATGGGCCTGCACCTCGGCATGGAAGTGCCGGCATGGCCGCCCGAGAACATTGAAGACCTCGCCAAGCGCTACGAAGACCAGTATTAA
PROTEIN sequence
Length: 337
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGGAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVGDIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPAERNRSEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTMTIETNGSITGEDAIAFAARILQDQLGVFVNFDEPQKEAEEEAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY*