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SCNpilot_cont_300_bf_scaffold_3378_27

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 14298..14723

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CD06_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 141.0
  • Bit_score: 261
  • Evalue 5.70e-67
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 141.0
  • Bit_score: 261
  • Evalue 7.90e-67
rplQ; 50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 141.0
  • Bit_score: 257
  • Evalue 3.00e-66

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
ATGCGCCACCAGAACGCCGGTCGCAAACTCAACCGTACTGCCAGCCACCGCAAGGCGATGTTCGCCAACATGGCTGCGTCGCTCATCACCCATGAGCAGATCGTCACCACCCTGCCGAAGGCGAAGGAAATCCGTCCGATCGTCGAGAAGCTCGTCACCCTTGGCAAGCGCGGCGACCTGCACGCTCGTCGTCAGGCGATCTCGCAGATCCGTGACGTCGCCGTCGTTTCGAAGCTGTTCGATGCGATCGCGACTCGCTACGCCAACCGCAACGGCGGCTATCTGCGTATCATGAAGGCCGGCTTCCGCCAGGGCGACAACGCGCCGCTCGCCGTCATCGAGTTCGTCGAGCGCGACGTCGATGCCAAGGGCGCAGCCGACAAGGCTCGCGTTGCCGCTGAAGCAGAAGCTGCCGAAGCCGCTTGA
PROTEIN sequence
Length: 142
MRHQNAGRKLNRTASHRKAMFANMAASLITHEQIVTTLPKAKEIRPIVEKLVTLGKRGDLHARRQAISQIRDVAVVSKLFDAIATRYANRNGGYLRIMKAGFRQGDNAPLAVIEFVERDVDAKGAADKARVAAEAEAAEAA*