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SCNpilot_cont_300_bf_scaffold_5089_21

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(20543..21394)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease (EC:3.6.3.31) similarity KEGG
DB: KEGG
  • Identity: 40.2
  • Coverage: 286.0
  • Bit_score: 198
  • Evalue 1.90e-48
Putrescine ABC transporter, permease protein PotI n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D1C0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 283.0
  • Bit_score: 528
  • Evalue 3.80e-147
  • rbh
Putrescine ABC transporter, permease protein PotI {ECO:0000313|EMBL:EYR79410.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Sh similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 283.0
  • Bit_score: 528
  • Evalue 5.30e-147

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGAGCACGTTCCGTCTATTCTCGGCAAAGTCCGCCCTGCTTGGCGCCTGGTCGCTGTTCGTCGTCTTCTTCCTGTTGCTTCCCATCGTGACGGTCCTGGTTTACTCATTCAACACCGGCAATTATCTGATCGCGTGGAAGGCGACAGGGTGGCGCTGGTACTGGCGTATTCTCGAGGACGGCAACATCCTCGCCACATTGCGCACCAGCCTGAGCGTCGCCGTTCTCTCCACGCTTCTCAGCCTTGTCGTCGGAGGAATGAGCGGTCTGATCCTCGGACGCCGGCCGGCGGCCATCGCCTATCCCTTGAGCCTGCTGCTGCTCACGATTATTTCCTTTCCCGAGATCGTGAAGGCGGTCGCCTATCTGACCTGGTTCGTCAAGATCGACCTGCAGATCGGAATCCTGCGTATCGCCATATCTCACGCGCTGTTCGGCAGCGCCATCGTCGCGTTCATCGTTCGCGCGCGGCTTTCCGGAATGGATGGCAGGATCGAGGAGGCGTCGGCCGATCTGGGCGCCACGCCCATGGTCACTTTCTTCACCGTGACGCTTCCCCTGCTCATGCCGGCTTTTCTGGTCGGTGGTCTTCTCGCCTTCACGCTGTCCTTCGACGACGTGATCGTCTCCCTGTTCGTTGGCACGGCCAACAGTACGACCTTGCCCGTCTATATCCTTGCCTCGGTCAGGCAGGGCCTGAAGGGCGATATTGCCGCCGTCTCGGCCGTCATGTTCTGTCTCACGATTCTCGCCTTCACCTGCGCGGGCATCTATCTCGCCCGCACCGGCGCATCCCGGCGCGACACCGTCCTGATGCTCGCGGGCCAGAACGATGCGCATGCCGGACAATAA
PROTEIN sequence
Length: 284
MSTFRLFSAKSALLGAWSLFVVFFLLLPIVTVLVYSFNTGNYLIAWKATGWRWYWRILEDGNILATLRTSLSVAVLSTLLSLVVGGMSGLILGRRPAAIAYPLSLLLLTIISFPEIVKAVAYLTWFVKIDLQIGILRIAISHALFGSAIVAFIVRARLSGMDGRIEEASADLGATPMVTFFTVTLPLLMPAFLVGGLLAFTLSFDDVIVSLFVGTANSTTLPVYILASVRQGLKGDIAAVSAVMFCLTILAFTCAGIYLARTGASRRDTVLMLAGQNDAHAGQ*