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SCNpilot_cont_300_bf_scaffold_5089_22

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(21391..21942)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine transport system permease protein PotB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5V6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 183.0
  • Bit_score: 350
  • Evalue 9.20e-94
  • rbh
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:EYR79411.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 183.0
  • Bit_score: 350
  • Evalue 1.30e-93
putative spermidine/putrescine ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 172.0
  • Bit_score: 166
  • Evalue 9.00e-39

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 552
CCGTTTTGGACGAGCTACCTGCTTCGCATGCTCGGCTGGCGCATTCTTCTTGGCGCCAATGGCGATATTTCCGCCGCTCTCCAGAACCTGCACCTGCTTGCCCCCGGCCAAGGTCTGCTCTTTACCCAGGCTGCCGTCCTGCTCGGGCTTGTCTACAATTTCCTGCCGGTGATGATCCTGCCAATCTATGTCTCGATCGAGCGCCTTTCACGCGATCACCGGGACGCCAGCCGTGATCTCTACGCCCGACCCTGGCAAACCTTCCTCAGTATCACGCTGCCGCTCACCTATCCCGGCATCATGGCCGGGATAACTGTGGTCTTCATCATGATGACCGGCGACTACGTCACGCCGGAGCTGATGGGCGGGGCCAAAGGCATGATGGTCGGTACCCTGATCTATTCGCAGTTCCTGCAGGGAGAAAACTGGCCTCTGGCTTCCGCCATGTCGCTTTCGCTGGTTTTCGTTCTGGTGGTCGCGGTCCTGGTGATGAGCGCCGTGGGATCGGGTCTTAACCGGCTTCCGACGCTCTTCAGAAGGGCGACCCGATGA
PROTEIN sequence
Length: 184
PFWTSYLLRMLGWRILLGANGDISAALQNLHLLAPGQGLLFTQAAVLLGLVYNFLPVMILPIYVSIERLSRDHRDASRDLYARPWQTFLSITLPLTYPGIMAGITVVFIMMTGDYVTPELMGGAKGMMVGTLIYSQFLQGENWPLASAMSLSLVFVLVVAVLVMSAVGSGLNRLPTLFRRATR*