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SCNpilot_cont_300_bf_scaffold_8660_11

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 7381..8130

Top 3 Functional Annotations

Value Algorithm Source
Putative transporter protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EYH6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 48.7
  • Coverage: 193.0
  • Bit_score: 166
  • Evalue 4.40e-38
Major facilitator superfamily {ECO:0000313|EMBL:EYR82828.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 218.0
  • Bit_score: 230
  • Evalue 3.40e-57
MFS transporter similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 195.0
  • Bit_score: 118
  • Evalue 3.80e-24

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGTCCCCGCCGGGTACCATGCTAGAGCCGCAGTCCGTCGCCCAGGCGTCGCGATCCTTCAGATGGTTCCTGGGATGCACCTTCGTTTCGGCTCTAGGGCGAAACGGCTACCACATTGCCTGCGCGTGGCTCCTCGTAGCGCAAGGACACGGCGCCGCCGCCGTTGCAGCTTTCTTCGCGATCATCAGCGTCACGGAATTGGTGGCGAGCCCGCTCGCCGGTTGGATTTCGGATCGCTATGATCGTCGCCTGCTCTGCGTTGCTGCGGACGTTGTCCGGTTTGCCGGCGCCTTGACGTTGGGAGCGTTGTTGCTCGTAGCAGATCCTCTCTGGGCGAGCTGGCTGTCTGCGACGGTCTTCGCGATTTGCGACAGGATCGCGCTTACATCGTCCCAGGCCATGATACCGACAGTTGGGGTCGGCCTGTCACCGGCAACGGCAAACTCGATCGTATTCTTTCTCATGCAATCGGGGAGCCTGGCAGCAGCAGTCCTAACCGGTACCCTCCTTCACGTGACCACGCCGACCTATACCTTTGCGGCACTCGCTGTGGCATTCCTGCTATCTGTTTGCTTCCTACTGGCGGTTCGACGAGAGGTGCCTCCTCGGAACGGCGTCACCGCAGAACATGGATCGACGTTGGCGCTGGATGCACCTCTGGCTGGCGGGCAACGCAATCGATTTCGGGTACCTGGAGAGCGCCTGGTCTGCCGGATCGATCCTGGGTGCTCTCCTTCTCATACCGCTTAG
PROTEIN sequence
Length: 250
MSPPGTMLEPQSVAQASRSFRWFLGCTFVSALGRNGYHIACAWLLVAQGHGAAAVAAFFAIISVTELVASPLAGWISDRYDRRLLCVAADVVRFAGALTLGALLLVADPLWASWLSATVFAICDRIALTSSQAMIPTVGVGLSPATANSIVFFLMQSGSLAAAVLTGTLLHVTTPTYTFAALAVAFLLSVCFLLAVRREVPPRNGVTAEHGSTLALDAPLAGGQRNRFRVPGERLVCRIDPGCSPSHTA*