ggKbase home page

SCNpilot_cont_300_bf_scaffold_8660_12

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_63_7

near complete RP 45 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 8150..8524

Top 3 Functional Annotations

Value Algorithm Source
Putative transporter protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CBW3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.5
  • Coverage: 123.0
  • Bit_score: 137
  • Evalue 8.30e-30
Major facilitator superfamily {ECO:0000313|EMBL:EYR82828.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 123.0
  • Bit_score: 137
  • Evalue 1.20e-29
putative transporter protein similarity KEGG
DB: KEGG
  • Identity: 37.5
  • Coverage: 104.0
  • Bit_score: 71
  • Evalue 1.60e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGCTGCAGTCGGTACTTCTCGTCCTTACGGCGTTCTCGTTCGCGAGCCTGAAGGCACTGGAACTTCCGTGGAGCCTCCTCGCGTTCGCTGTCCTCGGCGCGCTCCACAATTTGGGCAGGGTCGCAATTGAGGTCATGCTGCAGTCCTTTGTTCCGAGGACTGCCCTTGGCCGTGCGAAGGGTGCATTGCACAGCGTGGGTGTGGCGCTCGGAGTGATCCTTTTTGGGGTGGTCGCCGCAGTAGGGGACGAAGTGCGGCCCTCGACCATTTTTCTGGCGTTCGCCATCGTCCTTGCAGCGGGTACTGTGACTTTGGCGATGTTTCGCCTCGTCGGGAAGCTCGACACTGTCGGTGACGATCAGCGAGAGCTTTAG
PROTEIN sequence
Length: 125
MLQSVLLVLTAFSFASLKALELPWSLLAFAVLGALHNLGRVAIEVMLQSFVPRTALGRAKGALHSVGVALGVILFGVVAAVGDEVRPSTIFLAFAIVLAAGTVTLAMFRLVGKLDTVGDDQREL*