ggKbase home page

SCNpilot_cont_300_bf_scaffold_236_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

near complete RP 50 / 55 BSCG 49 / 51 ASCG 11 / 38
Location: comp(1323..2864)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321, ECO:0000313|EMBL:AJP72130.1}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule: similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 497.0
  • Bit_score: 907
  • Evalue 7.70e-261
DNA-directed RNA polymerase subunit beta n=1 Tax=Sphingomonas phyllosphaerae RepID=UPI0003B4C6E1 similarity UNIREF
DB: UNIREF100
  • Identity: 90.7
  • Coverage: 504.0
  • Bit_score: 909
  • Evalue 1.40e-261
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 497.0
  • Bit_score: 907
  • Evalue 1.50e-261

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGGCAACCAAGGCGATCGAGGGCGCTACCACGCCCAAGCGGCGCATCCGCAAGGTGTTCGGCAACATCCACGAAGTGGTGCAGATGCCGAACCTCATCGAGGTGCAGCGCGAAAGCTACGAGCAGTTCCTGCGCTCCGATCCCTCGATCGGCTATGTCTCGGGCCTGGAGAAGACGCTGCGCAGCGTCTTCCCGATCCGCGACTTCGCCGGCACCGCCGAGCTGGATTTCGTCAACTACGAGCTTGAGCCGCCGAAGTTCGACGTCGAGGAATGTCGCCAGCGCGGCATCACCTATGCCGCCCCGATGCGCGTCACGCTGCGCCTGATCGTGTTCGAGGTGGACCCGGATACGGAAACCCGCTCCGTGCTCGATATCAAGGAGCAGGACGTGTACATGGGCGACATGCCGCTCATGACCGAGAACGGCACCTTCTTCATCAACGGCACCGAGCGCGTCATCGTCAGCCAGATGCACCGGTCGCCGGGCGTGCTGTTCGATCACGATCGCGGCAAGACCCATGCGTCCGGCAAGTATCTGTTCGCCGCGCGCGTGATCCCCTATCGCGGCTCGTGGCTCGATTTCGAGTTCGACGCGAAGGACATCGTCAACGTCCGCATCGACCGGAAGCGCAAGCTGCCGGTGACGGCGCTGCTGTACGCGCTCGGCCTCAATTCCGAGGAAATCCTCAATCATTTCTACAACCGCCTCACCTTCGTTCGCGGCGAGGGCGGGTGGAAGATTCCGTTCCAGCCGGAGAACTGGCGCGGCGTGAAGCCGATGTTCGACATCGTCGACGGCAATTCGGGCGAGATCGTCTTCCCGGCCGGGCAGAAGATCAGCCCGCGCGCCGCCAACAAGGCGGCGAAGGACGGTCTCACCGACCTGCTGATCCCGACCGAGGAGATCTACGGCCGCTATTCGGCCTATGACCTCATCAACGAGGCGACCGGCGAGATCTACGTCGAGGCGGGTGACGAGATTTCGCCCGAGAACCTCGAGAAGCTCGACAAGGCGGGCGTCGATCGCATCGAGCTGCTCGACATCGATCACGTCGCTACCGGCCCGTGGATCCGCAACACGCTCAAGGCCGACAAGGCCGAGGAGCGCGAGCAGGCGCTGTCCGACATCTATCGCGTGATGCGCCCCGGCGAGCCGCCGACGCTCGAGACGGCCGAGGCGCTGTTCGCCGGCCTGTTCTTCGATCCGGACCGCTACGACCTGTCGGCGGTGGGCCGCGTCAAGCTCAACATGCGCCTCGATCTCGACACCGACGACAGCGTCACGACGCTGCGCACCGAGGATATCCTCGCGGTGGTCAAGACGCTCGTCGACCTGAAGGACGGCAAGGGCGAGATCGACGACATCGACAATCTCGGCAACCGCCGCGTCCGCTCGGTGGGCGAGCTGCTGGAGAACCAGTATCGCGTCGGCCTGCTCCGCATGGAGCGCGCCGTGAAGGAGCGCATGTCGTCAGTGGGTTCTTCGGCTCGTCGCAGCTCTCGCAGTTCATGGACCAGACCAACCCGCTCTCCGAAGTGA
PROTEIN sequence
Length: 514
MATKAIEGATTPKRRIRKVFGNIHEVVQMPNLIEVQRESYEQFLRSDPSIGYVSGLEKTLRSVFPIRDFAGTAELDFVNYELEPPKFDVEECRQRGITYAAPMRVTLRLIVFEVDPDTETRSVLDIKEQDVYMGDMPLMTENGTFFINGTERVIVSQMHRSPGVLFDHDRGKTHASGKYLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTALLYALGLNSEEILNHFYNRLTFVRGEGGWKIPFQPENWRGVKPMFDIVDGNSGEIVFPAGQKISPRAANKAAKDGLTDLLIPTEEIYGRYSAYDLINEATGEIYVEAGDEISPENLEKLDKAGVDRIELLDIDHVATGPWIRNTLKADKAEEREQALSDIYRVMRPGEPPTLETAEALFAGLFFDPDRYDLSAVGRVKLNMRLDLDTDDSVTTLRTEDILAVVKTLVDLKDGKGEIDDIDNLGNRRVRSVGELLENQYRVGLLRMERAVKERMSSVGSSARRSSRSSWTRPTRSPK*