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SCNpilot_cont_300_bf_scaffold_1538_14

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_62_8

near complete RP 46 / 55 BSCG 46 / 51 MC: 2 ASCG 10 / 38
Location: 10867..11502

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 n=1 Tax=Maricaulis sp. JL2009 RepID=UPI0003A61A0A similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 185.0
  • Bit_score: 210
  • Evalue 2.20e-51
Sigma-70 region 2 {ECO:0000313|EMBL:EKY30748.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminut similarity UNIPROT
DB: UniProtKB
  • Identity: 55.8
  • Coverage: 197.0
  • Bit_score: 203
  • Evalue 2.90e-49
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 197.0
  • Bit_score: 197
  • Evalue 3.20e-48

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
GTGCGGACCGAACCTCACGCACCTGCGTCGTCTGAACGGCCTGAAGGCCCAGGCGACTTCAAATCGGAACTGCTGTCGCTGATTCCGTTTCTGCGCGCATTTGCCCGTTCGCTGTGCGGCAATCCCGAAATGGCCGACGATCTGGCACAGGAAGCCCTCGTCCGTGCCTGGCAATCGCGCGACAGTTTCGTCCCCGGCACCAATCTGAAAGCCTGGCTGTTCACGATCCTGCGCAACCAGTTCTATTCCGATCGCAGGCGCGCCTGGCGGCAGGCGCCGTGGGATCAGGAATCGGCGGAGCGTATTCCCGGCAGTGCACAGGATCAGAACTGGGCCGCGGATCTGAGCGATACCGCGCGCGCCTTGCGCAGCCTGTCCGATGAACAGCGCGAGGCGCTGATCCTGGTCGGTGCCGGTGGCTTTTCTTATGAGGAGGCGGCGGCGATCTGCCATTGCGCCGTCGGCACGGTGAAAAGCCGCGTGGCGCGGGCGCGCCGGGCTCTGATCAATATTCTGGACGGAGATCGTTCGCTGCACGCGGTCAAGCGGCCTGGCAATGGTCAGGCCGCAAAAGAGATCATGGAGCAGCTCGACCGGTTGACACCGGATCATTCCTCCAAGGATGAGAAAGACTGA
PROTEIN sequence
Length: 212
VRTEPHAPASSERPEGPGDFKSELLSLIPFLRAFARSLCGNPEMADDLAQEALVRAWQSRDSFVPGTNLKAWLFTILRNQFYSDRRRAWRQAPWDQESAERIPGSAQDQNWAADLSDTARALRSLSDEQREALILVGAGGFSYEEAAAICHCAVGTVKSRVARARRALINILDGDRSLHAVKRPGNGQAAKEIMEQLDRLTPDHSSKDEKD*