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SCNpilot_cont_300_bf_scaffold_1310_14

Organism: SCNPILOT_CONT_300_BF_Brevundimonas_67_6

near complete RP 49 / 55 MC: 2 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: comp(13218..14402)

Top 3 Functional Annotations

Value Algorithm Source
type III secretion protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4CD08 similarity UNIREF
DB: UNIREF100
  • Identity: 50.3
  • Coverage: 390.0
  • Bit_score: 341
  • Evalue 1.20e-90
  • rbh
Translocation protein in type III secretion {ECO:0000313|EMBL:EGJ10479.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoat similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 392.0
  • Bit_score: 332
  • Evalue 7.80e-88
hscU; translocation protein in type III secretion similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 363.0
  • Bit_score: 239
  • Evalue 1.80e-60

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Taxonomy

Rubrivivax benzoatilyticus → Rubrivivax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
GTGGCGGAGAAGAACGACGGCGGCGACAAGACAGAGCGGCCGACGCCGAAACGGCTTCAGGACGCGCGTAAGAAGGGCGATGTCGCCAAGAGCAAGGACGTCGGCTCTACCGCCGTGCTGCTGGCCTGGCTGCTGGTCGGCCTGAATTTCGCCGCCCTGTTCGACGACGTGTTCCGCGTGATGGATCAGCCGTTCGGCGACGCTTTCGAGCAGGTCGCCTGGTCGGCGGCGCGGCGGTTCGTCTATCTGACGGCGCTGCTGCTGTTGCCGGTGGCCCTGTTCGCGTCGCTGATGGAGTTCCTGCAGACCGGGCCGGTCTTCACGCTGGAGAAGATGACGCCCAAGCTGGATCACCTGAACCCCGCCGAGGGGTTGAAGCGGATGTTCAACACCGACAACCTGTTCGAGGTGGCGAAATCGCTGGTGAAGACGGCTCTGCTGCTGGGACTGGCGGGGCTGATCCTGTTCGGCCAGTTCGATCGCATCCTGCGCCTGCCGGCGGCCCAGCCGGGCGAGGTGCTGGGCGCGTTCGGCGCGGCGGGGTTTCACCTGCTGGGCTGGACCCTGGTGGTCTTCGTGTTCGTCGCCATCCTGGATTCGGCCTATCAGCGCTTCAGCTTCATGAAGCGGCTGCGGATGAGCCGCCGCGACATCCGTCAGGAAGCCAAGGACATGGAGGGCGATCCCACGGTCAAGGCGCGGCGCCGCGAACTGGCCCAGGAATGGGCCCAGTCCAGCGCCGTCGGGTCCGTGCGCGGGGCCGCGGCCCTGGTGGTCAATCCGACCCACATTGCCGTGTCCCTGGCCTATGATCCCGGCGAGCACGTGGTGCCGGTGGTGGCGGGCAAGGGCGACGGCCTGATCGCGCGCGCCATGCGCGGCATGGCCGAGCGCGAAGGGGTGCCGATCATCCGCAACGTCCCTCTGGCCCGCGCCCTGCACGAACAGGTGCCGGTCGAGGCCGTGGTGCCCGAGGACATGTTCGCCGCCGTCGCCGAAGTGATCCTGACCGCGCGCCACCTGCGCGATGAAGCGGCGCGCGGCGAGACGCTCGACCCGGTCGACCTGTCGGACGAAGGCGAAGGATTGGGCGACGCCGCCGGGTCCGAGGACGCTTTCCGCCGCGCGCCCCTCTTTCCCGCCATGCCGGACGACGGCGTGGCTTCCGCCTCGGAGACCCGATGA
PROTEIN sequence
Length: 395
VAEKNDGGDKTERPTPKRLQDARKKGDVAKSKDVGSTAVLLAWLLVGLNFAALFDDVFRVMDQPFGDAFEQVAWSAARRFVYLTALLLLPVALFASLMEFLQTGPVFTLEKMTPKLDHLNPAEGLKRMFNTDNLFEVAKSLVKTALLLGLAGLILFGQFDRILRLPAAQPGEVLGAFGAAGFHLLGWTLVVFVFVAILDSAYQRFSFMKRLRMSRRDIRQEAKDMEGDPTVKARRRELAQEWAQSSAVGSVRGAAALVVNPTHIAVSLAYDPGEHVVPVVAGKGDGLIARAMRGMAEREGVPIIRNVPLARALHEQVPVEAVVPEDMFAAVAEVILTARHLRDEAARGETLDPVDLSDEGEGLGDAAGSEDAFRRAPLFPAMPDDGVASASETR*