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SCNpilot_cont_300_bf_scaffold_1310_17

Organism: SCNPILOT_CONT_300_BF_Brevundimonas_67_6

near complete RP 49 / 55 MC: 2 BSCG 46 / 51 MC: 3 ASCG 10 / 38 MC: 1
Location: 17481..19022

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion outer membrane pore, YscC/HrcC family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLU3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 523.0
  • Bit_score: 421
  • Evalue 9.10e-115
  • rbh
Type III secretion outer membrane pore, YscC/HrcC family {ECO:0000313|EMBL:EHR71429.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 523.0
  • Bit_score: 421
  • Evalue 1.30e-114
sctC; type III secretion system protein SctC similarity KEGG
DB: KEGG
  • Identity: 33.8
  • Coverage: 529.0
  • Bit_score: 276
  • Evalue 1.30e-71

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Taxonomy

Burkholderiales bacterium JOSHI_001 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1542
ATGACGATCAAGACGCCGCCCGCCCGCAAAGGCTTCAAGACCGCCCTCCTGACCGTGGCTTCCTTGGCCACGCTGCTCGGCCTGTCCGCGCCCGCTGCGGCGGGCGACCCGCCCATCGGCAACCAGACCCTGCAGATCGCCCCGCGCGAACAGCCGGTGGGTCAGTTCCTGCAGAGCTTCTTCGGCCAGTTGGGCGTGCCGGTCATCATCAGCCCCAACCTGCGCGGCACGGTGAACGGCGCCTTCAGCGGCCCGGCCTCGACCATCTTCAGCCAGGTGGCGGACGCCTTCGACCTGGTGGCCTATTACGACGGCGGGGCGGTCTACATCTATCAGACCTCCGAACTGACCAGCCAGTCGATCCCCGCCTCGCCGCAGATGCTGCGCCGCGTGCGCGCCACGGCGCAGGAAATGGGCCTGCTGGACAGCCGCAACACCCTTCAGCCCGCCGGGCAGATGCTGGTCGCCAACGGCACCCGCCGCTTCATCCAGCAGATCGACGAGATCGCCCGGGCCGGCCCCGGCGCTCGGGCCGAAGCCGCCCAGCCGACCTACGAATACCGCGTCTTCACCCTGCGCTACGCCTGGGCCGATGACGTGACCTTCGAGACGGCCCAGAGCGAAGTCACCATTCCGGGCGTCGCCTCCATCCTGCGCGCCATGGTCAGCAACGACCCGAACGGCGCCGTCGCCCGGCGCATCGAGACCCGCCGCTCGCCGCGCGTCGGGGGCCTGCGCGGTCAGGGTCTGGCCTCGCAAGGCGCGGCGCAGAACGGACTGATGGACGCCAGCTATGTCGATGGCGGCTTCACCCCCACGCCGGACACGCTCGGCCTGGCCCTGGCCGACGAACAGATGGCGGGCGGCGCCCCGGTCCAGCACGCGCGCATCCAGGCCGACACGCGCCTGAACGCCGTCATCGTGCGCGACACGGCCGACCGCATGGGGGCCTATGAGGCGCTGATCGCCGCCCTGGACAAGGAGCCGCAGCTTCTCGAAATCCAGGCCACCATCATCGACATCGACACGACCCGCGCGCGTCAGCTGGGCATCAGCTGGCGCTTCGACGACGGACGCGGCGGCATCCTGTTCGGCGACGGCACGCGCAACGACGACCGCCTGCGTCGCGGCCAGGACATCACCCCGCGCAACAACGGCCTGGCCATCTCGACCATCATCGGCAACGGCGACTACTTCGTCTCGCGCATCACGGCGATGGAGGATGAAGGCGTCGCCCGCATCGTCTCGCGGCCGCAGATCGTCACCCTGTCTAACGTCCAGGCCCTGTTCGAGAACACCCGCAGCTTCTACGTCGGCCTGGAAGGCGAGCGGGACGTCGACCTCTACAACGTCACCGCCGGGACCACGCTGAAGGTCACGCCGCACGTCCTGCGCGACCAGAACCAGACCCGTATCCGGATGCAGATCCAGATCGAGGACGGCTCCCTGACCGACGCCGACGTCGACGACATCCCGGTCGTGCAGCGCGCGGCCCTGAACACCCAGGCCATGATCCTGGAAGGGCAGAGCCTGCTGCTGGGC
PROTEIN sequence
Length: 514
MTIKTPPARKGFKTALLTVASLATLLGLSAPAAAGDPPIGNQTLQIAPREQPVGQFLQSFFGQLGVPVIISPNLRGTVNGAFSGPASTIFSQVADAFDLVAYYDGGAVYIYQTSELTSQSIPASPQMLRRVRATAQEMGLLDSRNTLQPAGQMLVANGTRRFIQQIDEIARAGPGARAEAAQPTYEYRVFTLRYAWADDVTFETAQSEVTIPGVASILRAMVSNDPNGAVARRIETRRSPRVGGLRGQGLASQGAAQNGLMDASYVDGGFTPTPDTLGLALADEQMAGGAPVQHARIQADTRLNAVIVRDTADRMGAYEALIAALDKEPQLLEIQATIIDIDTTRARQLGISWRFDDGRGGILFGDGTRNDDRLRRGQDITPRNNGLAISTIIGNGDYFVSRITAMEDEGVARIVSRPQIVTLSNVQALFENTRSFYVGLEGERDVDLYNVTAGTTLKVTPHVLRDQNQTRIRMQIQIEDGSLTDADVDDIPVVQRAALNTQAMILEGQSLLLG