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SCNpilot_cont_300_bf_scaffold_662_23

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

near complete RP 50 / 55 MC: 4 BSCG 48 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 23730..24422

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 90.0
  • Coverage: 230.0
  • Bit_score: 406
  • Evalue 1.80e-110
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 230.0
  • Bit_score: 406
  • Evalue 5.00e-111
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham similarity UNIPROT
DB: UniProtKB
  • Identity: 90.0
  • Coverage: 230.0
  • Bit_score: 406
  • Evalue 2.50e-110

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGCCGCAGGTTCAGTCACAACGGATCGCCGGTTCTTGCGACGACGATCAGGAACTGGTTGGCCGCGCCCGCGCGCGCGACGAAGGCGCCATCCGCGCCATCATGCAGGCGAACAACCGCAAGCTCTACCGGATCGCCCGCGGCATCCTTCGCAACGACGGCGAGGCCGAGGACGTCGTTCAGGAAACCTACGTTCGCGCCTTCACACATCTCGACAGCTTTCGCGGCGACTCCCGGCTCTCGACCTGGCTGGCGCGCATCGCCATGAACGAGGCGCTCGGCCGGCTGCGCCGCCAGCGCCCGAGCGTCGACTGGACGACGCTGGAGCCTGTGGCGTCGGACGCCCGCATCATCCAGTTTCCCATATCCGCCACGTCCGTCGATCCGGAAAAAACCATGGCCCAGCGCGAAATGCATCACATCGTCGAGCAGGCGGTTGACGAACTGCCCGAGGCGTTCCGTATCGTCTTCATCACCCGCGTGATCGAGGGAATGAACGTGGAGGAAACCGCGGAGATTCTCGACCTCAAGCCGGAAACCGTGAAGACCAGGCTTCACCGCGCCCGTGCGATGTTGCGCAAGAACGTCGAGAAGAAAATCGGTCCGGTGGTGATGGAGGCGTTTCCCTTCGCCGGCAAGCGCTGCGCGCGCCTGACCGAGGCGGTTCTTGGCCGACTCGGTCTGGGCAAATAA
PROTEIN sequence
Length: 231
MPQVQSQRIAGSCDDDQELVGRARARDEGAIRAIMQANNRKLYRIARGILRNDGEAEDVVQETYVRAFTHLDSFRGDSRLSTWLARIAMNEALGRLRRQRPSVDWTTLEPVASDARIIQFPISATSVDPEKTMAQREMHHIVEQAVDELPEAFRIVFITRVIEGMNVEETAEILDLKPETVKTRLHRARAMLRKNVEKKIGPVVMEAFPFAGKRCARLTEAVLGRLGLGK*