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SCNpilot_cont_300_bf_scaffold_1064_25

Organism: SCNPILOT_CONT_300_BF_Nitrobacter_62_24

near complete RP 50 / 55 MC: 4 BSCG 48 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(23990..24256)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QMZ8_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 88.0
  • Bit_score: 167
  • Evalue 7.00e-39
type III secretion protein similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 88.0
  • Bit_score: 167
  • Evalue 2.00e-39
Type III secretion protein {ECO:0000313|EMBL:ABE62399.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hambur similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 88.0
  • Bit_score: 167
  • Evalue 9.70e-39

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGAGCGTGGAGACCAAGGATCAGGTCGCAGTCGCCCTTCACTATGACAAGGGCAGCGGCGCGCCGCGCGTGGTCGCCAAGGGCAGGGGATCGCTGGGCGCGAGGATCATCGAGGTCGCCAAAGAGCACGACATTCCGATCGAGGAAAACGAGGTGCTGGCCGGCGCGCTGTCGCATGTCGAACTCGGCGACGAGATTCCGTCCGAGTTGTATAAGGCCGTCGCCGAGGTGCTGGTGTTCGTGCTGCGGCTCTCGGGACGAGCCTGA
PROTEIN sequence
Length: 89
MSVETKDQVAVALHYDKGSGAPRVVAKGRGSLGARIIEVAKEHDIPIEENEVLAGALSHVELGDEIPSELYKAVAEVLVFVLRLSGRA*