ggKbase home page

SCNpilot_cont_300_bf_scaffold_2834_10

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial

partial RP 37 / 55 MC: 1 BSCG 34 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: comp(7311..8012)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding transcriptional regulator HcaR n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z781_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 206.0
  • Bit_score: 166
  • Evalue 2.40e-38
DNA-binding transcriptional regulator HcaR {ECO:0000313|EMBL:EGD59499.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 206.0
  • Bit_score: 166
  • Evalue 3.40e-38
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 198.0
  • Bit_score: 163
  • Evalue 7.50e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 702
GCCTGCCAGCTGGCGCGCCAGGCGGCCGGTCCCGCGCAGGCGACGCTGAAGGTCGGCTTCGTGCCGGCGGCCGAGGTGAAGATCTTCCCGCGCGTCCTGCCGCTGATGCGCGCCGGCATGCCGGCCCTCGCCATGACGTTTCACAACCTGCCCACCGGCGCGCTCGAAGAGGGGCTGCTGGAGGGCTCGATCGACATCGCCTTCATGCGCCCGCCTCTGCACGACGAGCGCCTGACGAGCGAGACCGTGCTCAAAGAGCGCATGGTCGCCGTGCTCCCGGCCGATCACCCGCTCGCCGCCCGCCCGGCGATCACGGCCGCCGATCTTGCGGGCGAGAACCTCGTGCGCATCAATCCCCGCCAGGCCGGCGTGCTGCACGGCATCACGCAGGATTGGCTCGCCGACCATGGCATCGCGATGCGGTCCGGCCAGGATGCCGACAATGTGCTGACGCTGCTGACCCTCGTCAGCATGGGCGGCGGCGTCGCGCTGCTGCCCGATTATGCGAGCGAGCTGGTCTTCCGCAATGTCACGACACGCCCCTTGGCCGACCCGGCGGCACCGGCCCCGCTGATCATGGCCTGGCGGCGCGCCGATCCGTCGGAGGCGGCGGCCACCTTCCGCAATTTCGTCCGCGCCGCCTTTCGCCTGGCGGGCCAGGAATCGCAGACCGAAGAACCGCCGGGCCGGCAGGGTCGATAG
PROTEIN sequence
Length: 234
ACQLARQAAGPAQATLKVGFVPAAEVKIFPRVLPLMRAGMPALAMTFHNLPTGALEEGLLEGSIDIAFMRPPLHDERLTSETVLKERMVAVLPADHPLAARPAITAADLAGENLVRINPRQAGVLHGITQDWLADHGIAMRSGQDADNVLTLLTLVSMGGGVALLPDYASELVFRNVTTRPLADPAAPAPLIMAWRRADPSEAAATFRNFVRAAFRLAGQESQTEEPPGRQGR*