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SCNpilot_cont_300_bf_scaffold_2431_30

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_67_6_partial

partial RP 37 / 55 MC: 1 BSCG 34 / 51 MC: 3 ASCG 8 / 38 MC: 2
Location: comp(32402..33463)

Top 3 Functional Annotations

Value Algorithm Source
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EFS8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 305.0
  • Bit_score: 374
  • Evalue 1.50e-100
  • rbh
ABC-type sugar transport system periplasmic component {ECO:0000313|EMBL:EYR78260.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 305.0
  • Bit_score: 374
  • Evalue 2.10e-100
sugar ABC transporter periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 312.0
  • Bit_score: 358
  • Evalue 2.40e-96

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGCGTAATTATCTCAAGGGCTTCACGGCGGTCGCGGCGCTTTGCGCCGGCTTCGCGCAGGTGGCCGAGGCCAAGGACTACAAGGTCGCGGTGATCCGGTGGGAGCCCAACGACATCTATTTCAACGGCGTGGCGCTCGGCCAGCAGCAGGAAGCCAAGCGCATCCAGACCGAGACCGGTGACACGATCACCTTCAACGTCTTCGGCGCAAACGACGCCGGCGACCAGCTCAACGCCCTGCAGGCGCAGGTGGATCGCGGCGTCGACGGCGTGCTGCTCACCCCCTGGCGCGGCGAGGCGATGCGCGCCATCGTCCAGCAGCTCAACGAGGCGGGCGTTCCGGTCGTGACCAGCAATGCCTGGGTGCCCGGCGTGCCGCAGACCTTCGTCGCCTTCGACAACGAGACGGCCGGCCGCCTCGGCGGCGAGGCGCTGGTCAAGCGGCTCGATACGCTCCGCGGCGAGGGCTGGCGCAAGGATGGCGGCGTCTTCATCGAGCTGCGCTGCATCATCACGGCCTCGTTCGACATCGCCCGGCACAAGGGCTATCGCTCGGCCCTCGATCCCATCGCGGCCGAATATCCCGGCGTGAAGATCGTCGAGCAGGAAGCGGGCTGCGACGGCGGCAAGGCCAGCAAGGCGGTGAACGACATCATCTCGCGCGAAGGTCCGGACAAGATCCTCGGCGTCGCCAGCATCGACGGCACGATGGGCGTCGGCGGCGCGGTGCCGGCGTTCAAGGCGCAGGATCTTCTCTTCCCGATCGACAATCCCAAGCATATCCCGATCGCCACGATCGACGGGACGGTGCCGGAGTTCCAGTCGATGGCGCGCGGCGAGATCGATCACATCTCGGTCCAGCCGGCCACCGGCGAGGGCACGATCACCATGCGCCTGCTCTGGGCTCCGGTGAAGGTCAGCCAGCCGGACGCGATCAAGGGTCCATGGTACCAGACCCAGGCCTACAGCGTGCCGGGCGTCGCCAACTATGACGATCCGCGCAACTGGGCGAACGAGATGGCCGTCGTCACCACCGGCAAGATGCCCGACTTCGGCAAGTAA
PROTEIN sequence
Length: 354
MRNYLKGFTAVAALCAGFAQVAEAKDYKVAVIRWEPNDIYFNGVALGQQQEAKRIQTETGDTITFNVFGANDAGDQLNALQAQVDRGVDGVLLTPWRGEAMRAIVQQLNEAGVPVVTSNAWVPGVPQTFVAFDNETAGRLGGEALVKRLDTLRGEGWRKDGGVFIELRCIITASFDIARHKGYRSALDPIAAEYPGVKIVEQEAGCDGGKASKAVNDIISREGPDKILGVASIDGTMGVGGAVPAFKAQDLLFPIDNPKHIPIATIDGTVPEFQSMARGEIDHISVQPATGEGTITMRLLWAPVKVSQPDAIKGPWYQTQAYSVPGVANYDDPRNWANEMAVVTTGKMPDFGK*