ggKbase home page

SCNpilot_cont_300_bf_scaffold_2590_9

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_65_9_partial

near complete RP 43 / 55 MC: 3 BSCG 43 / 51 MC: 2 ASCG 11 / 38
Location: 8278..8688

Top 3 Functional Annotations

Value Algorithm Source
Germin subfamily 1 member 15 n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GXR1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 83.0
  • Coverage: 135.0
  • Bit_score: 253
  • Evalue 8.70e-65
Germin subfamily 1 member 15 {ECO:0000313|EMBL:EQB08766.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 135.0
  • Bit_score: 253
  • Evalue 1.20e-64
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.8
  • Coverage: 131.0
  • Bit_score: 180
  • Evalue 3.40e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 411
ATGGACATCACCCGGAAAGCAGAGCTCAAGACCGTCGACGGCGCGTCGGACTATTTCACCGGCAAGGTCACGATCACCGGCCAATTTCAGCGCCCCGCACCGTCGCGCGTCGGCGGCGCGATCGTTCACTTCGAGCCCGGCGCGCGTACCGCGTGGCATTCGCACCCCGCGGGGCAGACGCTGATCGTCACCGAAGGCGTCGGCTGGACGCAGATCGAGGGCGGCCCGAAGCTCGAATTTCGCGCCGGCGACGTGCTGTGGTGCCCGGCCGAGCACAAGCATTGGCACGGCGCGACCCCGCATGAGGGCATGACCCACATCGCCATCCAGGAATCGGTCGACGGCTCGCCGGTGACCTGGATGGAGAAGGTGACCGACGCGGAATATCTCGCGCCGCTGGCGCAGGGCTGA
PROTEIN sequence
Length: 137
MDITRKAELKTVDGASDYFTGKVTITGQFQRPAPSRVGGAIVHFEPGARTAWHSHPAGQTLIVTEGVGWTQIEGGPKLEFRAGDVLWCPAEHKHWHGATPHEGMTHIAIQESVDGSPVTWMEKVTDAEYLAPLAQG*