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SCNpilot_expt_300_bf_scaffold_540_24

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: comp(24174..25472)

Top 3 Functional Annotations

Value Algorithm Source
Anti-FecI sigma factor, FecR n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6UV22_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 47.8
  • Coverage: 433.0
  • Bit_score: 353
  • Evalue 2.60e-94
  • rbh
anti-FecI sigma factor FecR similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 433.0
  • Bit_score: 353
  • Evalue 7.20e-95
Anti-FecI sigma factor, FecR {ECO:0000313|EMBL:ADU37534.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax parado similarity UNIPROT
DB: UniProtKB
  • Identity: 47.8
  • Coverage: 433.0
  • Bit_score: 353
  • Evalue 3.60e-94

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1299
ATGACCGCCCAGGCCGCCGCATCTTCGCCGCTGCTCGCGAGCTTTCGCGACAGCTACCGCGATCTCGTGCGCTACCTCGCGCGGCGCACCGGCTGCGCCGACGAGGCGCGCGACGTGGCGCACGACACCTGGCTGCGCCTGGCCGACATGGACCTGCGCGGCGCACCGCCCGTGCAGTGCGAGGCAGAGGCGCGTGCCTACGTGTTCACCATGGCGCGCAACCTCGTCATCGACCGCCGCCGCCACGAGGGCATGGCGCAGCGCCATGCGCACGTGCTGGCCGCGCCGGGGCAGGGGCCCGACGAGACCGAGGCGCTGATGTACCGCCAGGCCATAGCCGCGGTCGAGGCGGCTCTCGCCACCGTGCCCGAGCGAACGCGCCAGGTCTTCCTGCGCCACCGCATCAACGGCGAGGACCAGGGCGCGCTCGCGGCCGAGTTCGGTATCTCGCGCAACATGGTCGAGCGCGACGTGATGCTGGCCATGGACCGTGTGCAGGCCGCCATGGAGCGCTGGCACGGCAGCGCGCCCACCGCGCGCCGCGGGCGGCGCCGCGCGCTCTCGGCGCTGCTGGGCGTGGCGGGCCTGTCCGTCTCGGGGGCGCTGGCATGGCGCTGGTGGCGCACCGCCGTGCCCGCATGGCAGCGCGCCGCCGCCACCGGCCATGCGCAGATGCTGCGCCAGCCGCTGCCCGACGGCGGCAGCGTCACGCTCGATGCGCAAAGCCGCGTGCAGCTTGCCTACTACGCCGCGCGGCGCAGCGCCCGCCTGCTGGCAGGCGCTGCCTTCTTCGACGTCGTGCGGGACGAGGATCGGCCCTTCGTCGTGGACGTGCCCTGCGAACAGGGCGCGGTGCGCATCACCGTGCTGGGCACGCGCTTCGGCGTGGAGCGGCTGCCGGGCGATGCGGTGGAGGTGCAGGTCGAATCGGGCCTGGTGCGCGTGGAATCGCTCGGCGCCGATGGCGGCGCGCGGACCCTGCGCGAGTTGCGCGCCGGCGAGGCCATGCGCATTTCGGCAGAGCCGGATGACACTCCGCCGCGCGTGCGCTCGGGCGTGGCGGCCGCGCCCTGGCGCCAGGGCATGGTGGCCTTCACCGACGTGCCTCTGGGCGAGGCGGTCGAACGCCTGCGCCGCTATCTGCCCCGTCCGGTGCTGGTCGAGCCGCAGGCCGCTCTATTGCGCCTGTCGGGCCAGGTGCGCATCGCCCAGGCCGAGGACTTCGTGCGTGCCCTGCCGTCCGTCGTGCCGGTACGGGTGCAGCTGGCGGCAGGACGCTGGAGCGTCGCGGCGCGCTGA
PROTEIN sequence
Length: 433
MTAQAAASSPLLASFRDSYRDLVRYLARRTGCADEARDVAHDTWLRLADMDLRGAPPVQCEAEARAYVFTMARNLVIDRRRHEGMAQRHAHVLAAPGQGPDETEALMYRQAIAAVEAALATVPERTRQVFLRHRINGEDQGALAAEFGISRNMVERDVMLAMDRVQAAMERWHGSAPTARRGRRRALSALLGVAGLSVSGALAWRWWRTAVPAWQRAAATGHAQMLRQPLPDGGSVTLDAQSRVQLAYYAARRSARLLAGAAFFDVVRDEDRPFVVDVPCEQGAVRITVLGTRFGVERLPGDAVEVQVESGLVRVESLGADGGARTLRELRAGEAMRISAEPDDTPPRVRSGVAAAPWRQGMVAFTDVPLGEAVERLRRYLPRPVLVEPQAALLRLSGQVRIAQAEDFVRALPSVVPVRVQLAAGRWSVAAR*