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SCNpilot_expt_300_bf_scaffold_1225_5

Organism: SCNPILOT_EXPT_300_BF_Alicycliphilus_69_12

near complete RP 50 / 55 BSCG 51 / 51 MC: 2 ASCG 13 / 38
Location: 3048..3947

Top 3 Functional Annotations

Value Algorithm Source
ABC-type transporter, periplasmic subunit family 3 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G5H3_ALIDK similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 299.0
  • Bit_score: 586
  • Evalue 2.10e-164
  • rbh
Extracellular solute-binding protein {ECO:0000313|EMBL:GAO26391.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alic similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 299.0
  • Bit_score: 588
  • Evalue 6.00e-165
ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 299.0
  • Bit_score: 586
  • Evalue 6.00e-165
  • rbh

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGAAGAAGCATTTGCTGGCCGCCGCGATCACCGTCCTGGCCGCAGGCAGCGCGATTGCGCAGGCCAACGATACGCTGGCCAAGATCAAGTCGAGCGGCGCCATCACCCTGGGCGTGCGCGAATCGTCGGGCGCTCTGGCCTATACCCTGGGCGACGGCAAGTACGTGGGCTTTCACACCGAGATGGCCGAGCGCATCGCGCGCGACCTGCAGAAGAAGCTGGGCCTGTCCAAGCTGGAGATCAAGTACCAGCCGGTGACCTCGCAGAACCGCATCCCGCTGGTCGTCAACGGCACGGTGGACCTGGAGTGCGGCTCCACCACCAACAACCTGGCGCGCCAGAAGGACGTGGCCTTCGCCGACACCACCTACGTGGAGGAGGTGCGCATCGCGGTCAAGGCCAACTCGGGCATCAACGACATCAAGGACCTGAACGGCAAGACCATCGTCACCACCACGGGCACCACCTCGGTGCAGACGCTGCGCAAGAACAAGCGCGCCGAGGGCATGAACTTCCGCGAAGTCATGGGCAAGGACCACGCCGACAGTTTCCTGATGCTGGAGACCGGCCGCGCCGACGCCTTCATCATGGACGGCTCCATCCTCGCGGGCAACATCTCCAAGTCCAAGAGCCCCAACGACTTCAAGATCGTGGGCGAGGCGCTGTCGGTCGAGCCCATCGCCTGCATGCTGCGCAAGGACGATCCGGCATTCAAGAAGGCCGTGGACGAATCCATCGTGGCCCAGATCAAGGACGGCACCCTGGCCAAGTCCTACGACAAGTGGTTCATGCAGCCGATTCCGCCCAACAACACCAAGGTGGGCCTGCCGCTGTCTCCGGCCACCAAGCAGGCCTGGGAGCACCCCAATGACAAGCCCATGGAAGACTACCAAAAGTAA
PROTEIN sequence
Length: 300
MKKHLLAAAITVLAAGSAIAQANDTLAKIKSSGAITLGVRESSGALAYTLGDGKYVGFHTEMAERIARDLQKKLGLSKLEIKYQPVTSQNRIPLVVNGTVDLECGSTTNNLARQKDVAFADTTYVEEVRIAVKANSGINDIKDLNGKTIVTTTGTTSVQTLRKNKRAEGMNFREVMGKDHADSFLMLETGRADAFIMDGSILAGNISKSKSPNDFKIVGEALSVEPIACMLRKDDPAFKKAVDESIVAQIKDGTLAKSYDKWFMQPIPPNNTKVGLPLSPATKQAWEHPNDKPMEDYQK*