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ACD2_16

Alias: ACD2_38308.4964.5

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD2_16_1
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(1..135)
-----------------
DNA (135bp)
protein (45aa)
seg (db=Seg db_id=seg from=33 to=44)
seg 33..44 Tax=ACD2
ACD2_16_2
ACD2, Gracilibacteria, Bacteria

Not on your lists

159..392
-----------------
DNA (234bp)
protein (78aa)
159..392 + (rbs_motif=TAA rbs_spacer=12bp)
hypothetical protein Tax=ACD2
ACD2_16_3
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(490..1203)
-----------------
DNA (714bp)
protein (238aa)
radical SAM domain-containing protein (db=KEGG evalue=1.0e-11 bit_score=73.6 identity=31.91 coverage=57.563025210084)
seg (db=Seg db_id=seg from=212 to=228)
seg (db=Seg db_id=seg from=181 to=196)
seg (db=Seg db_id=seg from=14 to=27)
ACD2_16_4
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(1267..2082)
-----------------
DNA (816bp)
protein (272aa)
1267..2082 - (rbs_motif=TAAA rbs_spacer=5bp)
hypothetical protein Tax=ACD2
ACD2_16_5
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(2109..2384)
-----------------
DNA (276bp)
protein (92aa)
2109..2384 - (rbs_motif=TAA rbs_spacer=3bp)
hypothetical protein Tax=ACD2
ACD2_16_6
ACD2, Gracilibacteria, Bacteria

Not on your lists

comp(3180..4421)
-----------------
DNA (1242bp)
protein (414aa)
integrase
seg (db=Seg db_id=seg from=378 to=395)
DNA breaking-rejoining enzymes (db=superfamily db_id=SSF56349 from=257 to=353 evalue=6.2e-14 interpro_id=IPR011010 interpro_description=DNA breaking-rejoining enzyme, catalytic core GO=Molecular Function: DNA binding (GO:0003677))
Phage_integrase (db=HMMPfam db_id=PF00589 from=257 to=353 evalue=2.0e-11 interpro_id=IPR002104 interpro_description=Integrase, catalytic core, phage GO=Molecular Function: DNA binding (GO:0003677), Biological Process: DNA recombination (GO:0006310), Biological Process: DNA integration (GO:0015074))
ACD2_16_7
ACD2, Gracilibacteria, Bacteria

Not on your lists

4543..4998
-----------------
DNA (456bp)
protein (152aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=18 to=40)
seg (db=Seg db_id=seg from=59 to=72)
transmembrane_regions 18..40 Tax=ACD2
Displaying 7 items

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