Alias: ACD2_20.34472.62
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD2_23_31
ACD2, ACD2, ACD2, ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(25812..25910)
|
25812..25910 - (rbs_motif=TAA rbs_spacer=11bp)
|
|
ACD2_23_32
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
comp(25942..26349)
|
ATP-utilizing enzyme of the PP-loop superfamily (modular protein)
Ribonuclease H-like (db=superfamily db_id=SSF53098 from=1 to=128 evalue=5.2e-16 interpro_id=IPR012337 interpro_description=Polynucleotidyl transferase, ribonuclease H fold GO=Molecular Function: nucleic acid binding (GO:0003676))
RnaseH (db=HMMPfam db_id=PF00075 from=4 to=128 evalue=5.7e-10 interpro_id=IPR002156 interpro_description=Ribonuclease H GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: ribonuclease H activity (GO:0004523))
no description (db=Gene3D db_id=G3DSA:3.30.420.10 from=3 to=130 evalue=1.3e-07)
|
|
ACD2_23_33
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(26340..26558)
|
coiled-coil (db=Coil db_id=coil from=40 to=61 evalue=NA)
seg (db=Seg db_id=seg from=41 to=52)
coiled-coil 40..61 Tax=ACD2
|
|
ACD2_23_34
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(26560..26760)
|
26560..26760 - (rbs_motif=TAA rbs_spacer=8bp)
hypothetical protein Tax=ACD2
|
|
ACD2_23_35
unknown
|
Not on your lists |
comp(26799..27701)
|
ATP synthase F1, gamma subunit n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174658F (db=UNIREF evalue=5.0e-48 bit_score=194.0 identity=35.88 coverage=98.0066445182724)
ATP synthase subunit gamma
seg (db=Seg db_id=seg from=167 to=178)
ATPsyn_F1gamma: ATP synthase F1, gamma (db=HMMTigr db_id=TIGR01146 from=1 to=297 evalue=2.5e-74 interpro_id=IPR000131 interpro_description=ATPase, F1 complex, gamma subunit GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, rotati
|
|
ACD2_23_36
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(27738..28409)
|
phosphohydrolase
HD (db=HMMPfam db_id=PF01966 from=23 to=126 evalue=1.4e-12 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=2 to=139 evalue=1.8e-10)
no description (db=HMMSmart db_id=SM00471 from=18 to=137 evalue=6.3e-10 interpro_id=IPR003607 interpro_description=Metal-dependent phosphohydrolase, HD domain GO=Molecular Function: catalytic activity (GO:0003824))
|
|
ACD2_23_37
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(28420..29925)
|
ATP synthase subunit alpha n=1 Tax=Nitratiruptor sp. SB155-2 RepID=ATPA_NITSB (db=UNIREF evalue=1.0e-173 bit_score=613.0 identity=61.55 coverage=93.2270916334661)
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
atpA; F0F1 ATP synthase subunit alpha (EC:3.6.3.14)
|
|
ACD2_23_38
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(30042..30554)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=105 to=127)
transmembrane_regions (db=TMHMM db_id=tmhmm from=73 to=95)
transmembrane_regions (db=TMHMM db_id=tmhmm from=42 to=60)
transmembrane_regions (db=TMHMM db_id=tmhmm from=16 to=38)
|
|
ACD2_23_39
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
comp(30584..30931)
|
30584..30931 - (rbs_motif=TAA rbs_spacer=12bp)
Uncharacterized protein {ECO:0000313|EMBL:EKE29951.1}; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
|
|
ACD2_23_40
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(30937..31311)
|
CheY-like (db=superfamily db_id=SSF52172 from=4 to=121 evalue=6.3e-14 interpro_id=IPR011006 interpro_description=CheY-like)
Response_reg (db=HMMPfam db_id=PF00072 from=7 to=94 evalue=1.2e-10 interpro_id=IPR001789 interpro_description=Signal transduction response regulator, receiver domain GO=Molecular Function: two-component response regulator activity (GO:0000156), Biological Process: two-component signal transduction system (phosphorelay) (GO:0000160), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:3.40.50.2300 from=4 to=94 evalue=1.9e-09)
TWO-COMPONENT SYSTEM SENSOR HISTIDINE KINASE/RESPONSE REGULATOR (INTESTINAL BACTERIA - BACTEROIDES THETAIOTAOMICRON) (db=HMMPanther db_id=PTHR23283:SF21 from=2 to=75 evalue=9.2e-07)
|
|
ACD2_23_41
uncultured bacterium (gcode 4), Bacteria
|
Not on your lists |
comp(31353..31607)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=23)
transmembrane_regions (db=TMHMM db_id=tmhmm from=35 to=57)
transmembrane_regions (db=TMHMM db_id=tmhmm from=62 to=79)
PQ-loop (db=HMMPfam db_id=PF04193 from=6 to=57 evalue=2.5e-08)
|
|
ACD2_23_42
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(31615..31863)
|
31615..31863 - (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
|
|
ACD2_23_43
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(31882..32358)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
seg (db=Seg db_id=seg from=52 to=65)
seg (db=Seg db_id=seg from=10 to=22)
coiled-coil (db=Coil db_id=coil from=36 to=64 evalue=NA)
|
|
ACD2_23_44
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(32470..32682)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=18 to=33)
transmembrane_regions (db=TMHMM db_id=tmhmm from=44 to=66)
ATPASE_C (db=PatternScan db_id=PS00605 from=33 to=54 evalue=0.0 interpro_id=IPR020537 interpro_description=ATPase, F0 complex, subunit C, DCCD-binding site)
|
|
ACD2_23_45
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(32868..33689)
|
ATP synthase F0 subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14] (db=KEGG evalue=2.0e-10 bit_score=70.1 identity=32.41 coverage=46.3503649635037)
transmembrane_regions (db=TMHMM db_id=tmhmm from=210 to=232)
transmembrane_regions (db=TMHMM db_id=tmhmm from=183 to=205)
transmembrane_regions (db=TMHMM db_id=tmhmm from=140 to=162)
|
|
ACD2_23_46
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(33833..34534)
|
seg (db=Seg db_id=seg from=117 to=126)
Concanavalin A-like lectins/glucanases (db=superfamily db_id=SSF49899 from=1 to=231 evalue=3.3e-10 interpro_id=IPR008985 interpro_description=Concanavalin A-like lectin/glucanase)
seg 117..126 Tax=ACD2
|