Alias: ACD2_20.34472.62
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
ACD2_23_1
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
comp(3..101)
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3..101 - (rbs_motif=TAA rbs_spacer=5bp)
hypothetical protein Tax=ACD2
|
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ACD2_23_2
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
comp(155..2917)
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coiled-coil (db=Coil db_id=coil from=188 to=213 evalue=NA)
seg (db=Seg db_id=seg from=332 to=351)
coiled-coil 188..213 Tax=ACD2
|
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ACD2_23_3
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
comp(3060..4199)
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Cardiolipin synthetase (EC:2.7.8.-)
seg (db=Seg db_id=seg from=189 to=199)
Phospholipase D/nuclease (db=superfamily db_id=SSF56024 from=216 to=373 evalue=1.0e-21)
Phospholipase D/nuclease (db=superfamily db_id=SSF56024 from=5 to=177 evalue=6.2e-17)
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ACD2_23_4
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
comp(4344..4496)
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4344..4496 - (rbs_motif=TAAAAA rbs_spacer=3bp)
hypothetical protein Tax=ACD2
|
|
ACD2_23_5
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
comp(4513..4821)
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coiled-coil (db=Coil db_id=coil from=74 to=95 evalue=NA)
coiled-coil 74..95 Tax=ACD2
|
|
ACD2_23_6
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
comp(4887..5069)
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seg (db=Seg db_id=seg from=12 to=26)
seg (db=Seg db_id=seg from=49 to=60)
seg 12..26 Tax=ACD2
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ACD2_23_7
uncultured bacterium (gcode 4), Bacteria
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Not on your lists |
comp(5051..6472)
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seg (db=Seg db_id=seg from=362 to=376)
coiled-coil (db=Coil db_id=coil from=46 to=67 evalue=NA)
Nucleotide cyclase (db=superfamily db_id=SSF55073 from=137 to=299 evalue=2.8e-08 interpro_id=IPR001054 interpro_description=Adenylyl cyclase class-3/4/guanylyl cyclase GO=Biological Process: cyclic nucleotide biosynthetic process (GO:0009190), Molecular Function: phosphorus-oxygen lyase activity (GO:0016849), Biological Process: intracellular signaling pathway (GO:0023034))
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ACD2_23_8
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
6585..7700
|
Protein YpsC
coiled-coil (db=Coil db_id=coil from=259 to=280 evalue=NA)
N6_MTASE (db=PatternScan db_id=PS00092 from=300 to=306 evalue=0.0 interpro_id=IPR002052 interpro_description=DNA methylase, N-6 adenine-specific, conserved site GO=Molecular Function: nucleic acid binding (GO:0003676), Molecular Function: methyltransferase activity (GO:0008168), Biological Process: methylation (GO:0032259))
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ACD2_23_9
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
comp(7707..8000)
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7707..8000 - (rbs_motif=TAA rbs_spacer=11bp)
hypothetical protein Tax=ACD2
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ACD2_23_10
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
comp(8032..8241)
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8032..8241 - (rbs_motif=TAA rbs_spacer=10bp)
hypothetical protein Tax=ACD2
|
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ACD2_23_11
unknown
|
Not on your lists |
comp(8336..9262)
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tRNA dimethylallyltransferase n=3 Tax=Eubacterium siraeum RepID=B0MNS5_9FIRM (db=UNIREF evalue=8.0e-58 bit_score=227.0 identity=42.65 coverage=88.9967637540453)
tRNA isopentenyltransferase MiaA
miaA: tRNA delta(2)-isopentenylpyrophosphate (db=HMMTigr db_id=TIGR00174 from=20 to=304 evalue=7.8e-57 interpro_id=IPR018022 interpro_description=tRNA delta(2)-isopentenylpyrophosphate transferase)
IPPT (db=HMMPfam db_id=PF01715 from=53 to=300 evalue=1.4e-56 interpro_id=IPR002627 interpro_description=tRNA isopentenyltransferase GO=Molecular Function: tRNA isopentenyltransferase activity (GO:0004811), Molecular Function: ATP binding (GO:0005524), Biological Process: tRNA processing (GO:0008033))
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ACD2_23_12
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
9328..9756
|
hypothetical protein
hypothetical protein alias=ACD2_20.34472.62G0012,ACD2_20.34472.62_12,ACD2_C00023G00012 id=34803 tax=ACD2 species=Candidatus Korarchaeum cryptofilum genus=Candidatus Korarchaeum taxon_order=unknown taxon_class=unknown phylum=Korarchaeota organism_group=BD1-5 organism_desc=BD1-5
hypothetical protein Tax=ACD2
|
|
ACD2_23_13
unknown
|
Not on your lists |
9764..10315
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NUDIX hydrolase n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KRY1_9BACT (db=UNIREF evalue=4.0e-18 bit_score=94.4 identity=35.8 coverage=95.1086956521739)
seg (db=Seg db_id=seg from=83 to=101)
Nudix (db=superfamily db_id=SSF55811 from=16 to=174 evalue=9.5e-13 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=10 to=156 evalue=2.0e-11 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
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ACD2_23_14
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
10316..10954
|
metal dependent phosphohydrolase
HD (db=HMMPfam db_id=PF01966 from=25 to=126 evalue=1.1e-11 interpro_id=IPR006674 interpro_description=Metal-dependent phosphohydrolase, HD subdomain)
HD-domain/PDEase-like (db=superfamily db_id=SSF109604 from=1 to=137 evalue=2.0e-09)
no description (db=HMMSmart db_id=SM00471 from=19 to=137 evalue=6.6e-06 interpro_id=IPR003607 interpro_description=Metal-dependent phosphohydrolase, HD domain GO=Molecular Function: catalytic activity (GO:0003824))
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ACD2_23_15
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
11023..11577
|
11023..11577 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=ACD2
|
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ACD2_23_16
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
11685..14447
|
seg (db=Seg db_id=seg from=769 to=784)
seg (db=Seg db_id=seg from=801 to=818)
seg (db=Seg db_id=seg from=836 to=850)
seg (db=Seg db_id=seg from=869 to=883)
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ACD2_23_17
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(14496..16145)
|
60 kDa chaperonin n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EA03_9CLOT (db=UNIREF evalue=6.0e-150 bit_score=534.0 identity=52.58 coverage=97.4545454545455)
hypothetical protein
hypothetical protein
hypothetical protein
|
|
ACD2_23_18
ACD2, Gracilibacteria, Bacteria
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Not on your lists |
comp(16178..16606)
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transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
transmembrane_regions (db=TMHMM db_id=tmhmm from=117 to=136)
transmembrane_regions 7..24 Tax=ACD2
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ACD2_23_19
unknown
|
Not on your lists |
comp(16712..17005)
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10 kDa chaperonin n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MKD5_9FIRM (db=UNIREF evalue=9.0e-16 bit_score=85.9 identity=44.21 coverage=94.8979591836735)
groES; co-chaperonin GroES; K04078 chaperonin GroES (db=KEGG evalue=1.0e-14 bit_score=82.0 identity=42.11 coverage=94.8979591836735)
GROES CHAPERONIN (db=HMMPanther db_id=PTHR10772 from=1 to=96 evalue=1.5e-18 interpro_id=IPR001476 interpro_description=Chaperonin Cpn10, subgroup GO=Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: protein folding (GO:0006457))
GroES-like (db=superfamily db_id=SSF50129 from=1 to=96 evalue=3.8e-18 interpro_id=IPR011032 interpro_description=GroES-like)
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ACD2_23_20
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(17178..17786)
|
metal-dependent phosphohydrolase
coiled-coil (db=Coil db_id=coil from=173 to=201 evalue=NA)
seg (db=Seg db_id=seg from=92 to=103)
|
|
ACD2_23_21
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
17927..19486
|
hypothetical protein
hypothetical protein
hypothetical protein
Lysyl-tRNA synthetase n=1 Tax=Clostridium phytofermentans ISDg RepID=A9KMI1_CLOPH (db=UNIREF evalue=2.0e-101 bit_score=373.0 identity=36.72 coverage=91.1538461538461)
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ACD2_23_22
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(19558..19809)
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=20 to=42)
transmembrane_regions (db=TMHMM db_id=tmhmm from=52 to=74)
transmembrane_regions 20..42 Tax=ACD2
|
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ACD2_23_23
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
20008..21108
|
hypothetical protein
seg (db=Seg db_id=seg from=323 to=340)
GTP_HflX: GTP-binding protein HflX (db=HMMTigr db_id=TIGR03156 from=2 to=366 evalue=9.0e-107 interpro_id=IPR016496 interpro_description=GTP-binding protein, HflX)
GTP-BINDING PROTEIN HFLX (db=HMMPanther db_id=PTHR10229 from=60 to=366 evalue=2.6e-87)
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ACD2_23_24
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
21108..21818
|
SNARE associated Golgi protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1K0_HERA2 (db=UNIREF evalue=2.0e-09 bit_score=66.2 identity=27.17 coverage=76.3713080168776)
SNARE associated Golgi protein (db=KEGG evalue=2.0e-09 bit_score=66.2 identity=27.17 coverage=76.3713080168776)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
seg (db=Seg db_id=seg from=207 to=225)
|
|
ACD2_23_25
unknown
|
Not on your lists |
comp(21836..22246)
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ATP synthase F1, epsilon subunit n=1 Tax=Selenomonas sputigena ATCC 35185 RepID=C9LS83_9FIRM (db=UNIREF evalue=2.0e-08 bit_score=61.2 identity=26.96 coverage=82.4817518248175)
coiled-coil (db=Coil db_id=coil from=88 to=116 evalue=NA)
ATP SYNTHASE DELTA/EPSILON CHAIN (db=HMMPanther db_id=PTHR13822 from=1 to=131 evalue=5.3e-12 interpro_id=IPR001469 interpro_description=ATPase, F1 complex, delta/epsilon subunit GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, r
ATP-synt_DE_N (db=HMMPfam db_id=PF02823 from=1 to=78 evalue=9.1e-11 interpro_id=IPR020546 interpro_description=ATPase, F1 complex, delta/epsilon subunit, N-terminal GO=Biological Process: ATP synthesis coupled proton transport (GO:0015986), Cellular Component: proton-transporting ATP synthase complex, catalytic core F(1) (GO:0045261), Molecular Function: hydrogen ion transporting ATP synthase activity, rotational mechanism (GO:0046933), Molecular Function: proton-transporting ATPase activity, rotational mec
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ACD2_23_26
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(22315..22701)
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||
ACD2_23_27
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
22735..23067
|
transmembrane_regions (db=TMHMM db_id=tmhmm from=78 to=100)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
transmembrane_regions 4..26 Tax=ACD2
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ACD2_23_28
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(22995..23330)
|
PUA domain-like (db=superfamily db_id=SSF88697 from=1 to=107 evalue=9.9e-11 interpro_id=IPR015947 interpro_description=Pseudouridine synthase/archaeosine transglycosylase-like)
PUA domain-like Tax=ACD2
|
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ACD2_23_29
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(23335..24315)
|
seg (db=Seg db_id=seg from=49 to=59)
seg (db=Seg db_id=seg from=4 to=12)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
transmembrane_regions 5..24 Tax=ACD2
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ACD2_23_30
ACD2, Gracilibacteria, Bacteria
|
Not on your lists |
comp(24375..25772)
|
Putative uncharacterized protein n=1 Tax=Bacteroides pectinophilus ATCC 43243 RepID=B7AX24_9BACE (db=UNIREF evalue=5.0e-176 bit_score=621.0 identity=67.82 coverage=92.9184549356223)
hypothetical protein
hypothetical protein
hypothetical protein
|