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SCNpilot_expt_300_bf_scaffold_1489_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 400..813

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional activator ligand binding domain protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V143_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 137.0
  • Bit_score: 224
  • Evalue 5.70e-56
Transcriptional activator ligand binding domain protein {ECO:0000313|EMBL:EFI53423.1}; Flags: Precursor;; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 137.0
  • Bit_score: 224
  • Evalue 8.00e-56
transcription activator, effector binding similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 137.0
  • Bit_score: 221
  • Evalue 1.40e-55

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGCTGAAGGGCAAGGCGACCTGGGACGCCGCCTTCGAGACCATCACCGGCTCGCTGAAGACGCTGTCCACGCTGCTGGAGAAGCAGAAGATCGCGGCCACCGGGCCGATGATGGTGGTCTACACCTCGACCGACGATGCCGGCTTCACCTTCACCGCTGAAATTCCGGTCGCGCAGGAACCGAAGAATCCGGGCAAGGACATCAGCATCGGCCAGTCGCCGGAAGGCCGCACGCTGAAATTCGTCCACCGCGGCTCCTACGACAACATGGACAACACCTACGAGGCGATCACCAACCATCTCGACGACAAGAAGCTCGAAGCCCGCGACACGTTCATTGAAGAATACGTCACCGATCCATTGAAGACCGCCGAAGACAAGCTCGTCATCAACGTCTTCGTGCCGTTGAAATAA
PROTEIN sequence
Length: 138
MLKGKATWDAAFETITGSLKTLSTLLEKQKIAATGPMMVVYTSTDDAGFTFTAEIPVAQEPKNPGKDISIGQSPEGRTLKFVHRGSYDNMDNTYEAITNHLDDKKLEARDTFIEEYVTDPLKTAEDKLVINVFVPLK*