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SCNpilot_expt_300_bf_scaffold_1489_6

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 3248..4759

Top 3 Functional Annotations

Value Algorithm Source
Signal recognition particle protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P2D6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 509.0
  • Bit_score: 881
  • Evalue 4.10e-253
  • rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizob similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 509.0
  • Bit_score: 881
  • Evalue 5.80e-253
ffh; signal recognition particle protein Ffh similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 516.0
  • Bit_score: 859
  • Evalue 6.20e-247

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1512
ATGTTCGACAATCTGTCGGAAAGGCTCGGAGGGATTCTCGACAAGCTGACGCGGCGCGGCGCGCTGTCGGAAGCCGATGTCGACGCCGCGATGCGCGAAGTGCGCCGCGCGCTGCTCGAAGCCGACGTCGCGCTCGACGTGGTGCGCTCCTTCACCGAGAAGGTGCGCGAACAGGCGATCGGCGCCACCGTCATCAAGTCGGTGACGCCCGGCCAGATGGTGGTGAAGATCGTCCACGACCAGCTCGTGGACACGCTCGGCGCCGACGGCCAGCTCATCGACCTCAACGCACCCGCGCCGGTGCCGATCATGATGGTCGGCCTGCAGGGCTCCGGCAAGACCACCACCACCGCCAAGCTCGCCCGCCGCCTGGTCCAGCGCGACAAGAAGAAAGTGCTGATGGCCTCGCTCGACGTCTACCGTCCGGCGGCGCAGGAACAGCTCGCGGTGCTCGGCCGCGATCTCGACATCCCGACTTTGCCGATCGTCGCCGGCCAGATGCCGACCCAGATCGCGCAGCGCGCGATCCAGGCCGCGAGACTCGGCGGCTATGACGTGGTGCTGCTCGACACCGCCGGCCGCACCACGCTCGACGAAGAGATGATGCAGGAAGCCGCCGCGGTGAAGGCCGCCGCGCAGCCGCATGAAGTGCTGCTGGTCGCCGACGCGCTGACCGGCCAGGACGCCGTCAATCTCGCCCGCGCCTTCAACGAACGCGTCGGTCTCACCGGCATCGCGCTGACCCGCGTCGACGGCGATGGCCGCGGCGGCGCCGCGCTGTCGATGCGCGCCGTCACCGGCAAGCCGATCAAGCTGATCGGCACCGGCGAAAAAACCGACGCGCTGGAGGACTTCCATCCCTCGCGCATCGCCGGCCGCATCCTCGGCATGGGCGACGTGGTGTCGCTGGTCGAGAAGGCCGCCGCCAATATCGACGCCGAGAAGGCCGCGCGCACCGCCGAGAAAATGCGCAAGGGCAAGTTCGATCTTGCCGATCTGCGCGACCAGCTCGCGCAGATGCAGAACATGGGCGGCATCGGCGGCCTGATGGGCATGATGCCCGGCATCGCCAAGATGAAGAACCAGCTCGCCGCCGCCAATCTCGACGAGAAGGTGATCAAGCGCCAGATGGCGGTGATCGATTCGATGACGCGCGAGGAGCGCAAGAATCCCGACATCCTGAAAGCCAGCCGCAAGAAGCGCATCGCGGCCGGCTCCGGCCTCAAGGTCGAGGAGGTCAACAAGCTGCTCAAGATGCACCGGAACATGGCCGACATGATGAAGGCCATGGGTCAGGGCAAGCGCGGGCCGCTCGCCGGCATGGCGCAGATGATGGGCTTCGGCGGCGGCGGCATGCCCTCGCCCGAGACGATGAAAGAGCTTGCAGCGAAGATGCCCGGCGGAATTCCGCAAGGCGCGCCGACGCTGCCGAAAGATTTTCCGGGCCTGCCGGGCCTGGGGAAACCGACATTGCCGGGCCTCGGATTGCCGGGGCTGGGCAAGAAGAAATAA
PROTEIN sequence
Length: 504
MFDNLSERLGGILDKLTRRGALSEADVDAAMREVRRALLEADVALDVVRSFTEKVREQAIGATVIKSVTPGQMVVKIVHDQLVDTLGADGQLIDLNAPAPVPIMMVGLQGSGKTTTTAKLARRLVQRDKKKVLMASLDVYRPAAQEQLAVLGRDLDIPTLPIVAGQMPTQIAQRAIQAARLGGYDVVLLDTAGRTTLDEEMMQEAAAVKAAAQPHEVLLVADALTGQDAVNLARAFNERVGLTGIALTRVDGDGRGGAALSMRAVTGKPIKLIGTGEKTDALEDFHPSRIAGRILGMGDVVSLVEKAAANIDAEKAARTAEKMRKGKFDLADLRDQLAQMQNMGGIGGLMGMMPGIAKMKNQLAAANLDEKVIKRQMAVIDSMTREERKNPDILKASRKKRIAAGSGLKVEEVNKLLKMHRNMADMMKAMGQGKRGPLAGMAQMMGFGGGGMPSPETMKELAAKMPGGIPQGAPTLPKDFPGLPGLGKPTLPGLGLPGLGKKK*