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SCNpilot_expt_300_bf_scaffold_1489_7

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 4799..5122

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S16 n=1 Tax=Afipia felis ATCC 53690 RepID=K8NMN4_AFIFE similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 108.0
  • Bit_score: 198
  • Evalue 3.40e-48
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53 similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 108.0
  • Bit_score: 198
  • Evalue 4.80e-48
rpsP; 30S ribosomal protein S16 similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 107.0
  • Bit_score: 197
  • Evalue 1.60e-48

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGTCAGTCGTCATTCGCCTCGCCCGCGCCGGCACCAAGAAGCGCCCGTTCTATCATGTCGTCGTCGCCGACTCGCGCTTTCCGCGCGACGGCCGCTTCATCGAGCGCCTCGGCTACTTCAACCCGCTGCTGTCGAAGGACAACGAGGAGCGCCTCAAGCTCGACCTCGACAAGGTGAAGGGCTGGCTCGCCAAGGGCGCGCAGCCGTCCGACCGCGTGATGCGCTTCCTCGATGCCGCCGGTGTTGCCAAGCGCACCGCGCGCAACAACCCGGAAAAGGCCGTGCCGCGCAAGGAGCGCAAGGCCGCCGAAGCGGCGAAGTAA
PROTEIN sequence
Length: 108
MSVVIRLARAGTKKRPFYHVVVADSRFPRDGRFIERLGYFNPLLSKDNEERLKLDLDKVKGWLAKGAQPSDRVMRFLDAAGVAKRTARNNPEKAVPRKERKAAEAAK*