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SCNpilot_expt_300_bf_scaffold_1489_10

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 6770..7153

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L19 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V150_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 126.0
  • Bit_score: 235
  • Evalue 3.90e-59
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia. similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 126.0
  • Bit_score: 235
  • Evalue 5.50e-59
rplS; 50S ribosomal protein L19 similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 131.0
  • Bit_score: 226
  • Evalue 3.90e-57

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Taxonomy

Afipia sp. 1NLS2 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGAACATCATCCAACAGCTCGAGCAGGAGCAGCTCGAAAAGCTGGCCGCCGGCAAGACCATTCCCGAGTTCGGACCGGGCGACACCGTGACCGTCAACGTCAAGGTCAAGGAAGGCGACCGCACCCGCGTGCAGGCCTATGAGGGCGTGTGCATCGGCCGCAACGGCGGCGGGCTCAACGAGAGCTTCACCGTGCGCAAGATTTCCTACGGCGAGGGCGTCGAGCGCGTCTTCCCGATCTATTCGCCGATGATCGACTCGATCAAGGTCGTGCGTCGCGGCAAGGTGCGTCGCGCCAAGCTGTATTATCTGCGCGGCCTGCGCGGCAAGTCGGCGCGCATCGTCGAGAAGCAGGAAAACCGTCAGGCGGCTTCCGCCGAGTAA
PROTEIN sequence
Length: 128
MNIIQQLEQEQLEKLAAGKTIPEFGPGDTVTVNVKVKEGDRTRVQAYEGVCIGRNGGGLNESFTVRKISYGEGVERVFPIYSPMIDSIKVVRRGKVRRAKLYYLRGLRGKSARIVEKQENRQAASAE*