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SCNpilot_expt_300_bf_scaffold_3649_9

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 7808..8059

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 83.0
  • Bit_score: 162
  • Evalue 2.90e-37
def; peptide deformylase (EC:3.5.1.88) similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 83.0
  • Bit_score: 160
  • Evalue 1.70e-37
peptide deformylase n=1 Tax=Afipia birgiae RepID=UPI00031AEB27 similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 83.0
  • Bit_score: 165
  • Evalue 3.30e-38

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 252
GTGTATGAGGAAGGCTGCCTGTCGATCCCGGACTATTATGAGGAGGTGGAGCGCCCGGCGAAGGTGCGCGTGCGCTTCATGGATATCGACGGCAAGGTCCACGAGGAAGACGCCGATGGACTCTACGCCACCTGCATCCAGCACGAGATCGATCATCTCAATGGCGTGTTGTTCATCGATTATCTGTCGAAGCTCAAGCGCGACCGGGTGATGAAGAAATTCACCAAGGCCGCACGCCTCGCGGCGAAGTAA
PROTEIN sequence
Length: 84
VYEEGCLSIPDYYEEVERPAKVRVRFMDIDGKVHEEDADGLYATCIQHEIDHLNGVLFIDYLSKLKRDRVMKKFTKAARLAAK*