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SCNpilot_expt_300_bf_scaffold_3718_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 266..643

Top 3 Functional Annotations

Value Algorithm Source
Membrane protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAS7_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 124.0
  • Bit_score: 175
  • Evalue 2.80e-41
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 69.4
  • Coverage: 124.0
  • Bit_score: 175
  • Evalue 7.80e-42
Putative transmembrane protein {ECO:0000313|EMBL:AEI04958.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha ca similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 124.0
  • Bit_score: 175
  • Evalue 3.90e-41

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGCCCGTTGCCTATTGGTGCGTTCTGGTCGCGGCGCTGCTGCCGCTGATCTGGGTGGCGCTCGCCAAATGGGGCGCGCCGACCACGAATCGCCATCCGCGCGAGGAGGTCGGCGATCTGCCGCCGCACCGGCGTCGCGCCTATGCCGCGCACCAGAATGCCTACGAGAATTTTCCGTTCTTCGCCGCGGCGGTGATTATCGCGGTGACGTCGGATGCGCCGCTCGCCGCCGTGAACGGCCTTGCGCTGCTCTATCTCGTGCTGCGCATCCTGCACGGGCTTTGCTATGTCGGAAATTACAGCACGGCGCGCTCGATCGTTTATACGCTCGGCCTGCTGGTCAATATCGCGATCTTCGTGCTGCCGGCGTGGCGTTGA
PROTEIN sequence
Length: 126
MPVAYWCVLVAALLPLIWVALAKWGAPTTNRHPREEVGDLPPHRRRAYAAHQNAYENFPFFAAAVIIAVTSDAPLAAVNGLALLYLVLRILHGLCYVGNYSTARSIVYTLGLLVNIAIFVLPAWR*