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SCNpilot_expt_300_bf_scaffold_1894_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1..366)

Top 3 Functional Annotations

Value Algorithm Source
Signal peptide peptidase SppA, 36K type n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GU57_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 119.0
  • Bit_score: 180
  • Evalue 8.40e-43
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:ERF81102.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="B similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 119.0
  • Bit_score: 180
  • Evalue 1.20e-42
sohB; proteinase similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 117.0
  • Bit_score: 178
  • Evalue 9.00e-43

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Taxonomy

Bradyrhizobium sp. DFCI-1 → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGACCGATACGAGCGGCGATAACAATGGCTTGATGTCGGGGCTGCTGCGCCTGTTGCCGGCGCGCTTCCGGCACACGGTGGTGGTGCCGGTGGTGCGGCTGTCGGGCACCATCGGCGCGGTAACGCCGCTGCGGCCCGGCCTGACGCTCGCCGGCGTCAGCCGTCTGCTCGAACGCGCCTTCGAGACCAGGAACGCCAAGGCGGTCGCGGTGGTGATCAATTCGCCGGGCGGCTCGCCGGTGCAGTCGCGCCAGATCCATGATCGCATCCGGCATCTTGCCGCGGAGAAACGGATTCCGGTGCTGGTGTTCGTCGAGGATGTTGCGGCGTCGGGCGGTTACATGATCGCCTGCGCGGGCGACGAG
PROTEIN sequence
Length: 122
MTDTSGDNNGLMSGLLRLLPARFRHTVVVPVVRLSGTIGAVTPLRPGLTLAGVSRLLERAFETRNAKAVAVVINSPGGSPVQSRQIHDRIRHLAAEKRIPVLVFVEDVAASGGYMIACAGDE