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SCNpilot_expt_300_bf_scaffold_1894_7

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(3262..3591)

Top 3 Functional Annotations

Value Algorithm Source
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE (EC:2.7.1.148) similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 98.0
  • Bit_score: 160
  • Evalue 3.00e-37
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 98.0
  • Bit_score: 160
  • Evalue 1.50e-36
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=3 Tax=Oligotropha carboxidovorans RepID=B6JEW5_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 80.6
  • Coverage: 98.0
  • Bit_score: 160
  • Evalue 1.10e-36

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGACCTCCCTGACCGACACCGCCCGCGCCAAGGTCAATCTCACCTTGCGCGTGCTCGGCCGGCGGCCGGACGGCTATCACGACCTCGACAGCATCGTGGCGTTCGCCGATTGCGCCGATCAGCTCTCGCTCGATCCGGATCGTCCGCTCGGTCTGACGGTGACCGGCCCGCGCGCGGCGGAATGCGGCGCGCTGGACGATAACCTCGTGCTGCGCGTCGCCCGTCATCTCGGCGAGCGCATCGCTGGTCTCAGGCTCGGGCACTTCGTGCTCGACAAGCATCTGCCGGCAGCAAGGCGAACGGTCTTGCGCCCGACGATCCGCGCCTGA
PROTEIN sequence
Length: 110
MTSLTDTARAKVNLTLRVLGRRPDGYHDLDSIVAFADCADQLSLDPDRPLGLTVTGPRAAECGALDDNLVLRVARHLGERIAGLRLGHFVLDKHLPAARRTVLRPTIRA*