ggKbase home page

SCNpilot_expt_300_bf_scaffold_6099_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2..1360)

Top 3 Functional Annotations

Value Algorithm Source
TolC n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QL60_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.1
  • Coverage: 432.0
  • Bit_score: 681
  • Evalue 5.60e-193
  • rbh
TolC {ECO:0000313|EMBL:EGP07713.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 432.0
  • Bit_score: 681
  • Evalue 7.90e-193
tolC; outer membrane efflux protein TolC similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 453.0
  • Bit_score: 665
  • Evalue 1.50e-188

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bradyrhizobiaceae bacterium SG-6C → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1359
ATGATCTGGCGCGCATTACGAGGATTTTGCCGGACGGGCGCGCGCCTGCTCCCCTGCCCGTTGATTCTCGCGGCGCTGCATGCTCCGGCCGGAGCGGAGACCCTGCAGGAGGCGCTGGTCAAGGCCTACCAGTCCAGCCCCCAGCTCAATGCCACGCGGGCCGGCCAGCGCGCCACCGACGAGAATGTGCCGCAGGCGCTTGCCGGCTATCGCCCCCAGATCGTCGCCAGCCTGAGCACGGGATTGCAGGCCGTCCGCAACGTGCTGCCGGATAACACCGTCCAGACCGCGACCCTGAAGCCGTGGACCATCGGCCTCACCGTGACCCAGACCCTGTTCAACGGCTTCAAGACCGCCAACAGCGTCCGCGTCGCCGAATTCCAAGTGATGTCCGGCCGGGAGGCGCTACGCAATACCGGTCAGGGCGTGCTGCTCGACGCCGTCACCGCCTATATGAACGTCATCGCCAACCAGGCGCTGGTGGAGACCCAACGCAGCAATGTCACCTTCCTGCGCGAGACGCTGGAAATCGCGAGAAAGCGGCTGGCCGCCGGCGACGTGACCCCGACCGACACCGCGCAGGCCGAGGCCCGCCTCAGCCGCGGGCTCGCGGACCTCAACGCCGCCGAAGTGGCGCTGCAGGTCAGCCGCGCCACCTATGCACAGGTAATCGGCAGCCCGCCTGGCCCGCTTGCCCCCGCCCAGACCGTCGACCGTTTCGTGCCGGGCGAACGCCAGGCCGTGATCGAGATGGCGATCCGGCAAAATCCGGCGGTGATCGCGGCGACCTATGACGTCGATGTCGCGACCACCACGATCAGCGTCGCGGAGAGCAGCCTGCTGCCGCAGGTCAGCGTTCAGGGCAACATCAACCGGCAGGTCAACACCGATACCAACCTCGACACCACCCGCACCAGTCAGGCCTCGGTGGTCGGCCAGCTTACCGTGCCGATCTATGACGGCGGCCTCGCCGCCTCGCAGACCCGGCAGGCCAAGGAGCTGGCCGGGCAAAGCCGGCAGGTGCTGGAGCAGATCCGCAACCAGGCCCGCACCGCCGCGATCAGCGCCTTTGTCACCAACGAGGGCACCAAGGTCGCCCTCGCCGCCGCCGAAAGCGAGGTCAAGGCCGCCGGCATCGCCCTCGCCGGCGTCCGCCGCGAGGCGCAGGCCGGCCAGCGCACCACGCTCGACGTGTTGAACTCGCAGCAGGACCTCACCGCCGCCCGTACCCGGCAGATCGTCGGCCAGCGCGACCGCGTGATCGCCTCCTACACGCTGCTCAGCGCAGTCGGGAAACTGGACGTGCGCACGCTCGGGCTCAACACGCCGGATTACCTGCCCGACGTGCACTATCATCAG
PROTEIN sequence
Length: 453
MIWRALRGFCRTGARLLPCPLILAALHAPAGAETLQEALVKAYQSSPQLNATRAGQRATDENVPQALAGYRPQIVASLSTGLQAVRNVLPDNTVQTATLKPWTIGLTVTQTLFNGFKTANSVRVAEFQVMSGREALRNTGQGVLLDAVTAYMNVIANQALVETQRSNVTFLRETLEIARKRLAAGDVTPTDTAQAEARLSRGLADLNAAEVALQVSRATYAQVIGSPPGPLAPAQTVDRFVPGERQAVIEMAIRQNPAVIAATYDVDVATTTISVAESSLLPQVSVQGNINRQVNTDTNLDTTRTSQASVVGQLTVPIYDGGLAASQTRQAKELAGQSRQVLEQIRNQARTAAISAFVTNEGTKVALAAAESEVKAAGIALAGVRREAQAGQRTTLDVLNSQQDLTAARTRQIVGQRDRVIASYTLLSAVGKLDVRTLGLNTPDYLPDVHYHQ