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SCNpilot_expt_300_bf_scaffold_11106_4

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(2020..2508)

Top 3 Functional Annotations

Value Algorithm Source
Hydroxymethylbilane synthase {ECO:0000256|SAAS:SAAS00018413}; EC=2.5.1.61 {ECO:0000256|SAAS:SAAS00018413};; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizo similarity UNIPROT
DB: UniProtKB
  • Identity: 81.1
  • Coverage: 148.0
  • Bit_score: 239
  • Evalue 3.70e-60
porphobilinogen deaminase n=1 Tax=Afipia birgiae RepID=UPI000382127A similarity UNIREF
DB: UNIREF100
  • Identity: 84.6
  • Coverage: 143.0
  • Bit_score: 241
  • Evalue 5.30e-61
hemC; hydroxymethylbilane synthase HemC similarity KEGG
DB: KEGG
  • Identity: 78.4
  • Coverage: 148.0
  • Bit_score: 237
  • Evalue 2.20e-60

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
GTGGTGACAATTGCGATGCGGATCGGGACGCGAAAGAGCACCATGGCGCTGGCGCAGACCGAGCAGATCGCCCGGCATCTCAATCGCGCCGTTCCCGAGCTTGAGGTCGAGATCGTCAAATTCGAGACGGTCGGCGATCAGGACCAGACCAGCAAGCTGCTGAACCATGGCGGCAAGGGCGGCGCGTTCGTCGCCCAGATTCGCGAGGCGGTGCGCAATGGCACGCTGCATGCGGCGATGCATTCGCTCAAGGACATGCCGGGCAATGAGGACACGCCGGGTCTCGTGATCGGCGCCACGCTGACGCGCGATCCGCCGGGCGATGCCTTGGTAATGCGTCCCGGCGTGACGTTCGACGATCTCAAGCGCACGCGCGGCAAGGGCTACAAGATCGGCACCAACGCGGTGCGCCGCGCCGCCTATGCGCGGCGGCTGTTTCCCGAAAGCGCCTGCCGGATGGCGGCGAGGTCGGTCCCGCCGATGCGCTGA
PROTEIN sequence
Length: 163
VVTIAMRIGTRKSTMALAQTEQIARHLNRAVPELEVEIVKFETVGDQDQTSKLLNHGGKGGAFVAQIREAVRNGTLHAAMHSLKDMPGNEDTPGLVIGATLTRDPPGDALVMRPGVTFDDLKRTRGKGYKIGTNAVRRAAYARRLFPESACRMAARSVPPMR*