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SCNpilot_expt_300_bf_scaffold_8805_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1601..2359)

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5V1_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 76.3
  • Coverage: 253.0
  • Bit_score: 384
  • Evalue 6.10e-104
High-copy suppressor of rspA {ECO:0000313|EMBL:CEG08309.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scrat similarity UNIPROT
DB: UniProtKB
  • Identity: 76.7
  • Coverage: 253.0
  • Bit_score: 387
  • Evalue 1.70e-104
mdtD; multidrug resistance protein MdtD similarity KEGG
DB: KEGG
  • Identity: 76.5
  • Coverage: 251.0
  • Bit_score: 383
  • Evalue 5.00e-104

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
GGCCTTTATATCTGGCACGCGCGGCGCACCGCCTCTCCGGTGCTTGACTTCACGCTGCTGCGGCACACCACGCTGCGCGCCAGCCTCGGCGGCGGCTTCGTCTTCCGCATGGGCGTCGGCGCGCTGCCGTTCCTGCTGCCGCTGCTGATGCAAATCGGTTTCGGGCTGTCGCCGTTCAAATCCGGCATGGTGACGTTTGCGTCGGCCGTCGGCGCCATGGGCATGAAAACGCTCGCCGCGCGCATCATCCGCACTTTCGGATTCCGCCCGGTGCTGATCCTCAACGGCCTGATCGCCTGCGTCTCGATAGCGGCATGCGCGCTGTTCACGCCGTCGACGCCGGTGCTGCTGATCATGTTCGTGCTGATCGTCGGCGGCTTCTTCCGCTCGCTGCAATTCACCGCCGTCAACACCATGGCCTATGCCGATGTCGACGTCTCGGAGATGAGCCGGGCGACCACGCTGGCCAGCGTCAACCAGCAACTGGCCATCTCGGCCGGCGTCGCGCTCGGCGCGTTCGCGGTGGAAGCGACCATGGCGCTGCGCCAATCCGCCGAGCTCACCGCCGCCGACTTCGCGCCGGCCTTCGTGGTGATCTCACTGGTGGCGGCGACCTCGACCTGGGCGTTCTACCGTCTGCCGCAGGATGCCGGACACCAGGTCTCCGGCCAGAAGGTCACGGCGTTGCAGGGACCGCACGCGGCTCAGACCGCGCCCAGCGAAGGCACCGCCGAGGCGCGCGACCAGCGGCTCAACTAG
PROTEIN sequence
Length: 253
GLYIWHARRTASPVLDFTLLRHTTLRASLGGGFVFRMGVGALPFLLPLLMQIGFGLSPFKSGMVTFASAVGAMGMKTLAARIIRTFGFRPVLILNGLIACVSIAACALFTPSTPVLLIMFVLIVGGFFRSLQFTAVNTMAYADVDVSEMSRATTLASVNQQLAISAGVALGAFAVEATMALRQSAELTAADFAPAFVVISLVAATSTWAFYRLPQDAGHQVSGQKVTALQGPHAAQTAPSEGTAEARDQRLN*