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SCNpilot_expt_300_bf_scaffold_10978_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 2270..2836

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=2 Tax=Oligotropha carboxidovorans RepID=RL3_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.2
  • Coverage: 179.0
  • Bit_score: 354
  • Evalue 6.50e-95
  • rbh
rplC; 50S ribosomal protein L3 similarity KEGG
DB: KEGG
  • Identity: 97.2
  • Coverage: 179.0
  • Bit_score: 354
  • Evalue 1.80e-95
50S ribosomal protein L3 {ECO:0000255|HAMAP-Rule:MF_01325}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carb similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 179.0
  • Bit_score: 354
  • Evalue 9.20e-95

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGCGCTCCGGAGTGATCGCACAAAAGGTCGGGATGACGCGGGTCTTTACAGAGGCCGGTGAGCATATCCCTGTGACCGTGCTGAAGCTGGGCAACTGCCAGGTTGTTGGCCATCGCACCAAGGACAAGAACGGTTACACTGCGCTGCAGCTCGGCGCGGGAGCCCGCAAGTCCGTTTACATGCCGAAGGCCGAGCGCGGACAGTTTGCTGTCGCCAAGGTTGAGCCGAAGCGCAAGGTCACCGAGTTCCGCGTCTCCGAGGATGCGATGATCCCGGTCGGCGCCGAGATCCAGGCAGACCACTTCGTCGTCGGCCAGTTCGTCGATGTCACCGGCACTTCGGTCGGTAAGGGTTTCGCCGGCGGTATGAAGCGCTGGAACTTCGGCGGTCTGCGCGCCACGCACGGCGTGTCGGTCTCGCATCGTTCGATCGGTTCAACCGGTGGCCGTCAGGACCCGGGCAAGACCTTCAAGAACAAGAAGATGCCTGGTCACATGGGTGTCGATCGCATCACCACTCTGAACCTTCGCGTCGTCTTCGAAGGGCGGCTGGATCACCGTGCGTGA
PROTEIN sequence
Length: 189
MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGAGARKSVYMPKAERGQFAVAKVEPKRKVTEFRVSEDAMIPVGAEIQADHFVVGQFVDVTGTSVGKGFAGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVVFEGRLDHRA*