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SCNpilot_expt_300_bf_scaffold_16510_3

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(1438..1623)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination protein NusA n=2 Tax=Bradyrhizobiaceae RepID=F7QI81_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 61.0
  • Bit_score: 95
  • Evalue 1.80e-17
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 61.0
  • Bit_score: 95
  • Evalue 2.50e-17
nusA; transcription elongation factor NusA similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 61.0
  • Bit_score: 89
  • Evalue 3.60e-16

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Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
GGCTGGACCGAGCGCAAGGACGGCGAAGCCGTCAAGCAACCGGGCATTCTCGATGCGGGCGACATCTCGCGCGAGGACGCCGAAACCTTGATCATGCAGGCGCGCGTCGTCGCCGGCTGGATCACCGAGGCCGACCTGCACAAGCCCGCCGAGGGCGAGGCAGCGGCCGAAACCCATCCGGCATAA
PROTEIN sequence
Length: 62
GWTERKDGEAVKQPGILDAGDISREDAETLIMQARVVAGWITEADLHKPAEGEAAAETHPA*