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SCNpilot_expt_300_bf_scaffold_24310_2

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: 983..1249

Top 3 Functional Annotations

Value Algorithm Source
Inner-membrane translocator n=1 Tax=Afipia sp. 1NLS2 RepID=D6V5L6_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 89.0
  • Bit_score: 170
  • Evalue 6.30e-40
LIV-I protein H {ECO:0000313|EMBL:CEG08416.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease ba similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 89.0
  • Bit_score: 169
  • Evalue 2.60e-39
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 89.0
  • Bit_score: 159
  • Evalue 5.40e-37

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Taxonomy

Afipia felis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
GTGGATCTGCTCGCGCAAATCCTGATCAACGGCGTGCTGCTGGGAGGGCTCTACGCCGTGATGGCGCTCGGTCTCGCTCTGGTGTGGGGCGTGCTGAACATCGTCAATCTGGCGCATGGCGCTTTCATCATGCTCGGCGCCTACGTCTCCTGGCACCTTTACACCTACCTGCATATCGATCCCTTCCTGGGACTTCCGATCACGGCGGTTGTGATGTTCGCGGTCGGCTACGCCATGCAGCGCGGGCTGCTCAACCTCATTGTCCGC
PROTEIN sequence
Length: 89
VDLLAQILINGVLLGGLYAVMALGLALVWGVLNIVNLAHGAFIMLGAYVSWHLYTYLHIDPFLGLPITAVVMFAVGYAMQRGLLNLIVR