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SCNpilot_expt_300_bf_scaffold_24578_1

Organism: SCNPILOT_EXPT_300_BF_Afipia_64_5_fragment

partial RP 36 / 55 MC: 3 BSCG 39 / 51 MC: 4 ASCG 9 / 38
Location: comp(3..638)

Top 3 Functional Annotations

Value Algorithm Source
secretin n=1 Tax=Bradyrhizobium japonicum RepID=UPI00035C0F3F similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 206.0
  • Bit_score: 305
  • Evalue 3.00e-80
Uncharacterized protein {ECO:0000313|EMBL:EKS34127.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717 similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 213.0
  • Bit_score: 305
  • Evalue 5.50e-80
putative pilus assembly protein CpaC similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 208.0
  • Bit_score: 302
  • Evalue 1.20e-79

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGACATCCGCCCCTCGCATCGTGCGAACATCTCTGGTCCGCGCCCTCTGCGCCGCGGCGGTCTCCGCGCTGGTGCTCAATCCGGCCATCTCTCCGGTGGTTGCGGGGGATGCACGCCCGATTCCGGCCCGCGCCGATGGCAGCGGCCTCAACGCCCGCACCCTCGCGCTCGGCATCGGCAAATCGCTCGTCATCGACCTGCCGCGCGACATCAAGGACGTCCTGGTCGCCGACCCCAAGATCGCCAACGCGGTGGTGCGTTCGGCGCAGCGCGCCTACATCATCGGCGCGGCGGTGGGCCAGACCAATATCGTGTTCTTCGACGCCGCGGGCCAGCAGATCGCGGCCTATGACATCGCGGTGACCCGCGACCTCAACGGCATCCGCTCCGCGATCCGGCAGGCTCTGCCGAACTCCCAGATCCAGATCGAGGGCCTCGGCGACGGCGTCGTGCTGTCGGGCTCGGCCGCCAACCAGGTCGAGGCGCAGCAGGCGGTGGAACTGGCAGCGCGTCTTGCCAGCGGCCTCGATCATGTCGTCAACAGCATCGCGGTGCGCGGCCGTGACCAGGTGATGCTCAAGGTCACCGTGGCCGAAGTGCAGCGCGACATCATCAAGCAGCTCGGCGTCGATCTC
PROTEIN sequence
Length: 212
MTSAPRIVRTSLVRALCAAAVSALVLNPAISPVVAGDARPIPARADGSGLNARTLALGIGKSLVIDLPRDIKDVLVADPKIANAVVRSAQRAYIIGAAVGQTNIVFFDAAGQQIAAYDIAVTRDLNGIRSAIRQALPNSQIQIEGLGDGVVLSGSAANQVEAQQAVELAARLASGLDHVVNSIAVRGRDQVMLKVTVAEVQRDIIKQLGVDL